Variant report

Variant	rs2139733
Chromosome Location	chr12:117726742-117726743
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10744891	0.96[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1483757	0.83[EUR][1000 genomes]
rs1843019	0.83[EUR][1000 genomes]
rs1843020	0.83[EUR][1000 genomes]
rs2293050	0.96[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4766842	0.96[CEU][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4767526	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7305526	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7967614	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7970178	0.96[CEU][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9658330	0.96[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9658351	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9658354	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117660000-117727400	Weak transcription	Psoas Muscle	Psoas
2	chr12:117697200-117746200	Weak transcription	Brain Anterior Caudate	brain
3	chr12:117714200-117728000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr12:117719200-117731800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr12:117719600-117730800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr12:117722400-117732000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr12:117723400-117727000	Strong transcription	Skeletal Muscle Male	skeletal muscle
8	chr12:117725800-117728000	Strong transcription	Skeletal Muscle Female	skeletal muscle
9	chr12:117725800-117728600	Strong transcription	NHEK	skin
10	chr12:117726200-117726800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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