Variant report

Variant	rs214153
Chromosome Location	chr7:117330767-117330768
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:117114628-117119361..7:117326534-117332210	H1-hESC	embryonic stem cell:	embryo
2	7:116307511-116321259..7:117326534-117332210	Hela-S3	cervix:
3	7:116957165-116964911..7:117326534-117332210	H1-hESC	embryonic stem cell:	embryo
4	7:116434729-116454408..7:117326534-117332210	H1-hESC	embryonic stem cell:	embryo
5	7:115890993-115892266..7:117326534-117332210	H1-hESC	embryonic stem cell:	embryo
6	7:117100350-117112126..7:117326534-117332210	H1-hESC	embryonic stem cell:	embryo
7	7:116500954-116503335..7:117326534-117332210	Hela-S3	cervix:
8	7:116604327-116608063..7:117326534-117332210	Hela-S3	cervix:

No data

No data

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Variant related genes	Relation type
ENSG00000105976	Chromatin interaction
ENSG00000135269	Chromatin interaction
ENSG00000105989	Chromatin interaction
ENSG00000228368	Chromatin interaction
ENSG00000198898	Chromatin interaction
ENSG00000001626	Chromatin interaction

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117327000-117335000	Weak transcription	Dnd41	blood
2	chr7:117327000-117376400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:117328600-117331200	Enhancers	Fetal Intestine Small	intestine
4	chr7:117330200-117330800	Active TSS	Duodenum Mucosa	Duodenum
5	chr7:117330400-117331400	Weak transcription	Stomach Mucosa	stomach
6	chr7:117330600-117331000	Weak transcription	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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