The 2.0 version of rSNPBase

Variant report

Variant rs2143590
Chromosome Location chr1:210504287-210504288
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:210503000-210505600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:210503000-210506000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:210503200-210504400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:210503200-210504400 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr1:210503200-210504600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:210503200-210505400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:210503200-210505600 Weak transcription Primary B cells from peripheral blood blood
8 chr1:210503200-210506400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:210503200-210506600 Enhancers Fetal Heart heart
10 chr1:210503200-210507200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr1:210503200-210507400 Enhancers Primary T cells fromperipheralblood blood
12 chr1:210503200-210516800 Weak transcription Lung lung
13 chr1:210503400-210505200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:210503400-210505400 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:210503400-210505600 Weak transcription Primary hematopoietic stem cells blood
16 chr1:210503600-210504800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:210503600-210505400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:210503600-210546800 Weak transcription Fetal Intestine Small intestine
19 chr1:210503800-210504400 Enhancers Right Atrium heart
20 chr1:210503800-210505200 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:210503800-210505800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:210504000-210504400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr1:210504000-210504400 Weak transcription GM12878-XiMat blood
24 chr1:210504000-210505400 Weak transcription Duodenum Mucosa Duodenum
25 chr1:210504000-210505600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr1:210504000-210505600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:210504000-210505600 Weak transcription Fetal Thymus thymus
28 chr1:210504000-210506400 Weak transcription Dnd41 blood
29 chr1:210504200-210505200 Weak transcription Thymus Thymus
30 chr1:210504200-210505600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:210504200-210505600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:210504200-210505600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:210504200-210505600 Weak transcription NHEK skin
34 chr1:210504200-210505800 Weak transcription HMEC breast
35 chr1:210504200-210506000 Weak transcription Left Ventricle heart
36 chr1:210504200-210508200 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:210504200-210512800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015