Variant report

Variant rs2145381
Chromosome Location chr1:171885165-171885166
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171879800-171908000 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:171880400-171885600 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr1:171881000-171885400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:171881000-171886800 Enhancers Brain Cingulate Gyrus brain
5 chr1:171882000-171889400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:171882400-171885200 Enhancers HMEC breast
7 chr1:171882400-171886000 Enhancers NHEK skin
8 chr1:171883000-171885200 Weak transcription HSMMtube muscle
9 chr1:171883000-171885800 Enhancers Brain Hippocampus Middle brain
10 chr1:171883200-171890400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:171883400-171887400 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:171883600-171887600 Enhancers Brain Substantia Nigra brain
13 chr1:171883800-171885600 Enhancers Brain Inferior Temporal Lobe brain
14 chr1:171884200-171885600 Weak transcription Brain Anterior Caudate brain
15 chr1:171884200-171903400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:171884400-171885600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:171884400-171886000 Enhancers Brain Angular Gyrus brain
18 chr1:171885000-171885200 Enhancers A549 lung
19 chr1:171885000-171885800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:171885000-171886200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:171885000-171887200 Enhancers Fetal Adrenal Gland Adrenal Gland

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