Variant report

Variant rs2156349
Chromosome Location chr11:58668565-58668566
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58651000-58671200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr11:58659400-58671000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr11:58665000-58668800 Enhancers Primary hematopoietic stem cells blood
4 chr11:58665200-58671600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr11:58667400-58668600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
6 chr11:58667600-58668800 Active TSS Fetal Brain Female brain
7 chr11:58667800-58668600 Active TSS iPS-18 Cell Line embryonic stem cell
8 chr11:58667800-58668600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
9 chr11:58667800-58668600 Enhancers Fetal Muscle Trunk muscle
10 chr11:58667800-58668800 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr11:58667800-58668800 Active TSS H1 Cell Line embryonic stem cell
12 chr11:58667800-58668800 Active TSS HUES48 Cell Line embryonic stem cell
13 chr11:58667800-58669000 Active TSS HUES6 Cell Line embryonic stem cell
14 chr11:58668000-58668600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr11:58668000-58668600 Active TSS Fetal Intestine Large intestine
16 chr11:58668000-58668600 Active TSS Fetal Kidney kidney
17 chr11:58668000-58668600 Active TSS NH-A brain
18 chr11:58668000-58668800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:58668000-58668800 Active TSS H9 Cell Line embryonic stem cell
20 chr11:58668000-58668800 Active TSS iPS-20b Cell Line embryonic stem cell
21 chr11:58668000-58668800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:58668000-58668800 Enhancers Primary monocytes fromperipheralblood blood
23 chr11:58668000-58668800 Enhancers Monocytes-CD14+_RO01746 blood
24 chr11:58668000-58669000 Active TSS HUES64 Cell Line embryonic stem cell
25 chr11:58668200-58668600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr11:58668200-58668600 ZNF genes & repeats Brain Germinal Matrix brain
27 chr11:58668200-58668600 Enhancers Spleen Spleen
28 chr11:58668200-58668800 Bivalent Enhancer Primary B cells from peripheral blood blood
29 chr11:58668200-58668800 Enhancers Fetal Intestine Small intestine
30 chr11:58668200-58668800 Bivalent Enhancer Fetal Muscle Leg muscle
31 chr11:58668200-58668800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
32 chr11:58668200-58669200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr11:58668400-58668600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr11:58668400-58668800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr11:58668400-58668800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:58668400-58668800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr11:58668400-58668800 Enhancers Liver Liver
38 chr11:58668400-58668800 Enhancers Fetal Brain Male brain
39 chr11:58668400-58668800 Enhancers Pancreas Pancrea
40 chr11:58668400-58668800 Enhancers A549 lung
41 chr11:58668400-58668800 Enhancers NHEK skin
42 chr11:58668400-58668800 Active TSS Osteobl bone
43 chr11:58668400-58669200 Enhancers HMEC breast
44 chr11:58668400-58669400 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr11:58668400-58670600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr11:58668400-58670600 Weak transcription NHDF-Ad bronchial
47 chr11:58668400-58670800 Weak transcription NHLF lung
48 chr11:58668400-58672000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr11:58668400-58672400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr11:58668400-58672400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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