Variant report
| Variant | rs2160523 |
|---|---|
| Chromosome Location | chr12:12242810-12242811 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12225000-12255000 | Weak transcription | Small Intestine | intestine |
| 2 | chr12:12226600-12245000 | Weak transcription | Fetal Brain Male | brain |
| 3 | chr12:12232800-12257000 | Weak transcription | HSMMtube | muscle |
| 4 | chr12:12234800-12259600 | Weak transcription | Aorta | Aorta |
| 5 | chr12:12235400-12243600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 6 | chr12:12235400-12244600 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr12:12235400-12245000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 8 | chr12:12235400-12245200 | Weak transcription | Pancreas | Pancrea |
| 9 | chr12:12235400-12260200 | Weak transcription | Gastric | stomach |
| 10 | chr12:12235400-12260800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 11 | chr12:12235400-12278800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 12 | chr12:12237400-12259800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 13 | chr12:12238000-12245000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 14 | chr12:12239600-12249200 | Strong transcription | Fetal Intestine Small | intestine |
| 15 | chr12:12240400-12244200 | Weak transcription | Fetal Lung | lung |
| 16 | chr12:12240400-12254200 | Weak transcription | Stomach Mucosa | stomach |
| 17 | chr12:12240600-12245400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 18 | chr12:12240600-12245400 | Weak transcription | Brain Germinal Matrix | brain |
| 19 | chr12:12240600-12256800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 20 | chr12:12241000-12244200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 21 | chr12:12241000-12244200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 22 | chr12:12241000-12250200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 23 | chr12:12241000-12260600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 24 | chr12:12241000-12273400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 25 | chr12:12241200-12245000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 26 | chr12:12241200-12245600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 27 | chr12:12241200-12245600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 28 | chr12:12241200-12256800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 29 | chr12:12241200-12261000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 30 | chr12:12241400-12252000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 31 | chr12:12241400-12272600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 32 | chr12:12241800-12244200 | Weak transcription | HepG2 | liver |
| 33 | chr12:12241800-12245000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 34 | chr12:12241800-12245400 | Weak transcription | Fetal Stomach | stomach |
| 35 | chr12:12241800-12247400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 36 | chr12:12241800-12260400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 37 | chr12:12242000-12243600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr12:12242000-12243800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 39 | chr12:12242000-12243800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 40 | chr12:12242000-12243800 | Weak transcription | Osteobl | bone |
| 41 | chr12:12242000-12244000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 42 | chr12:12242000-12244200 | Weak transcription | Fetal Muscle Leg | muscle |
| 43 | chr12:12242000-12245200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 44 | chr12:12242000-12245800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 45 | chr12:12242000-12251000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 46 | chr12:12242000-12257000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr12:12242200-12243800 | Weak transcription | NHLF | lung |
| 48 | chr12:12242800-12245200 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 49 | chr12:12242800-12249000 | Strong transcription | Fetal Intestine Large | intestine |
