Variant report

Variant rs2162661
Chromosome Location chr12:104997626-104997627
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:104983200-104997800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr12:104987800-104997800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
3 chr12:104989200-104997800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr12:104989400-104997800 Enhancers Cortex derived primary cultured neurospheres brain
5 chr12:104989400-105030600 Strong transcription Dnd41 blood
6 chr12:104991000-104997800 Weak transcription Aorta Aorta
7 chr12:104991600-104998000 Weak transcription Fetal Kidney kidney
8 chr12:104992800-104997800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr12:104993200-104999400 Weak transcription Brain Germinal Matrix brain
10 chr12:104993200-105006200 Weak transcription Fetal Heart heart
11 chr12:104993200-105012600 Weak transcription Gastric stomach
12 chr12:104993400-104999600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr12:104993800-104998000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr12:104994200-104997800 Weak transcription Fetal Muscle Leg muscle
15 chr12:104995200-104997800 Enhancers NHEK skin
16 chr12:104995200-104998200 Enhancers HMEC breast
17 chr12:104995400-104997800 Genic enhancers Primary T cells fromperipheralblood blood
18 chr12:104995400-104998800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr12:104995400-105000000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr12:104995600-104997800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:104995600-104997800 Weak transcription H9 Cell Line embryonic stem cell
22 chr12:104995600-104997800 Weak transcription Colonic Mucosa Colon
23 chr12:104995600-104998000 Weak transcription H1 Cell Line embryonic stem cell
24 chr12:104995800-104997800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr12:104996000-104998000 Enhancers Duodenum Mucosa Duodenum
26 chr12:104996200-104998000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr12:104996200-104999200 Enhancers Primary T helper cells fromperipheralblood blood
28 chr12:104996200-105000800 Enhancers HSMMtube muscle
29 chr12:104996400-104997800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr12:104996400-104997800 Enhancers NHLF lung
31 chr12:104996400-104997800 Enhancers Osteobl bone
32 chr12:104996400-104998200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
33 chr12:104996600-104997800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
34 chr12:104996600-105000200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr12:104996800-104997800 Enhancers HSMM muscle
36 chr12:104996800-104997800 Enhancers Monocytes-CD14+_RO01746 blood
37 chr12:104996800-104998000 Enhancers Skeletal Muscle Male skeletal muscle
38 chr12:104996800-104998200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr12:104996800-104998400 Genic enhancers Thymus Thymus
40 chr12:104996800-104998400 Enhancers Spleen Spleen
41 chr12:104996800-104998600 Enhancers Primary T cells from cord blood blood
42 chr12:104996800-104999200 Enhancers Primary T helper cells PMA-I stimulated --
43 chr12:104996800-104999400 Enhancers HUES6 Cell Line embryonic stem cell
44 chr12:104996800-105002600 Weak transcription Fetal Brain Female brain
45 chr12:104997000-104997800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr12:104997000-104998600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr12:104997000-104998600 Enhancers Primary T helper naive cells from peripheral blood blood
48 chr12:104997000-104998800 Enhancers Primary T killer memory cells from peripheral blood blood
49 chr12:104997200-104997800 Enhancers Primary neutrophils fromperipheralblood blood
50 chr12:104997200-104997800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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