Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10231745	0.95[CHB][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs10232169	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10250415	0.83[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11185607	0.80[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs12531822	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12536579	0.83[JPT][hapmap]
rs13245197	0.84[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1433513	0.83[JPT][hapmap]
rs1433515	0.83[JPT][hapmap]
rs17132322	0.83[JPT][hapmap]
rs1918607	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2362300	0.83[JPT][hapmap]
rs4257961	0.83[JPT][hapmap]
rs4490784	0.83[JPT][hapmap]
rs4559189	0.83[JPT][hapmap]
rs4579477	0.83[JPT][hapmap]
rs4917022	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4917163	1.00[YRI][hapmap]
rs6583451	0.83[ASN][1000 genomes]
rs6969707	0.83[JPT][hapmap]
rs6977837	0.85[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7789709	1.00[YRI][hapmap]
rs7799014	0.85[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830992	chr7:48497408-48686442	Weak transcription ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv888008	chr7:48568425-48652224	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:48600400-48634200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr7:48624000-48630200	Strong transcription	Primary neutrophils fromperipheralblood	blood

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