The 2.0 version of rSNPBase

Variant report

Variant rs2186411
Chromosome Location chr11:59359841-59359842
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:59334200-59366200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr11:59334200-59382000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr11:59340800-59378200 Strong transcription Fetal Thymus thymus
4 chr11:59342000-59379000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr11:59342200-59378200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
6 chr11:59343600-59378400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:59343800-59382000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr11:59344000-59360400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:59346200-59360400 Weak transcription Esophagus oesophagus
10 chr11:59346200-59360400 Weak transcription Right Ventricle heart
11 chr11:59346200-59361000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr11:59346600-59360400 Weak transcription H9 Cell Line embryonic stem cell
13 chr11:59350000-59360400 Weak transcription Gastric stomach
14 chr11:59350200-59360800 Weak transcription Stomach Mucosa stomach
15 chr11:59350200-59361000 Weak transcription Psoas Muscle Psoas
16 chr11:59350200-59378200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:59350400-59360600 Weak transcription NHLF lung
18 chr11:59351400-59371400 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr11:59351800-59369000 Strong transcription Placenta Placenta
20 chr11:59352000-59360400 Weak transcription Pancreas Pancrea
21 chr11:59352200-59371200 Strong transcription Primary T cells fromperipheralblood blood
22 chr11:59352400-59360600 Weak transcription Fetal Heart heart
23 chr11:59352400-59369200 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr11:59352400-59378000 Strong transcription Sigmoid Colon Sigmoid Colon
25 chr11:59352600-59378200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr11:59352800-59378400 Strong transcription Primary monocytes fromperipheralblood blood
27 chr11:59353000-59368600 Strong transcription Liver Liver
28 chr11:59353000-59371200 Strong transcription Left Ventricle heart
29 chr11:59353200-59377800 Strong transcription Fetal Muscle Trunk muscle
30 chr11:59353200-59378200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr11:59353200-59378400 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr11:59353400-59378000 Strong transcription Fetal Intestine Large intestine
33 chr11:59353400-59378200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr11:59353400-59378200 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr11:59353400-59378800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr11:59353600-59378200 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr11:59353600-59378600 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr11:59353800-59363800 Strong transcription Adipose Nuclei Adipose
39 chr11:59353800-59378200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr11:59353800-59378200 Strong transcription Duodenum Mucosa Duodenum
41 chr11:59353800-59378400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr11:59353800-59379400 Strong transcription Primary T regulatory cells fromperipheralblood blood
43 chr11:59354000-59371200 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr11:59354200-59369000 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr11:59354200-59370000 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr11:59354200-59378200 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr11:59354400-59364200 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr11:59354400-59379400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr11:59354600-59362600 Strong transcription Fetal Brain Female brain
50 chr11:59354600-59369000 Strong transcription Ovary ovary

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Last update: Aug 31, 2015