The 2.0 version of rSNPBase

Variant report

Variant rs2189025
Chromosome Location chr8:90849184-90849185
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:90845800-90850200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr8:90846000-90850400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr8:90846000-90850600 Enhancers Primary T helper cells PMA-I stimulated --
4 chr8:90846600-90850000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr8:90847200-90849800 Enhancers Primary B cells from peripheral blood blood
6 chr8:90847200-90850200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr8:90847400-90849200 Enhancers A549 lung
8 chr8:90847600-90850000 Enhancers Stomach Mucosa stomach
9 chr8:90847600-90860600 Weak transcription Aorta Aorta
10 chr8:90848000-90849200 Enhancers Muscle Satellite Cultured Cells --
11 chr8:90848000-90850200 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr8:90848200-90849200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr8:90848200-90849200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr8:90848200-90850200 Enhancers NHLF lung
15 chr8:90848400-90850200 Enhancers Primary T helper cells fromperipheralblood blood
16 chr8:90848400-90850200 Enhancers Osteobl bone
17 chr8:90848400-90850400 Enhancers Primary T cells from cord blood blood
18 chr8:90848600-90849200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr8:90848600-90849800 Enhancers Primary B cells from cord blood blood
20 chr8:90848600-90850000 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr8:90848600-90850000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr8:90848600-90850000 Enhancers Sigmoid Colon Sigmoid Colon
23 chr8:90848600-90850400 Enhancers Primary monocytes fromperipheralblood blood
24 chr8:90848600-90851600 Enhancers Primary neutrophils fromperipheralblood blood
25 chr8:90848800-90849200 Active TSS GM12878-XiMat blood
26 chr8:90848800-90849400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr8:90848800-90849800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr8:90848800-90849800 Weak transcription Pancreas Pancrea
29 chr8:90849000-90849200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr8:90849000-90849200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr8:90849000-90849400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr8:90849000-90849400 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr8:90849000-90849400 Flanking Active TSS HUVEC blood vessel
34 chr8:90849000-90849400 Flanking Active TSS NHDF-Ad bronchial
35 chr8:90849000-90849600 Active TSS Pancreatic Islets Pancreatic Islet
36 chr8:90849000-90849800 Enhancers NHEK skin
37 chr8:90849000-90850000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr8:90849000-90850000 Flanking Active TSS NH-A brain
39 chr8:90849000-90850200 Enhancers Primary hematopoietic stem cells blood
40 chr8:90849000-90850400 Enhancers Placenta Amnion Placenta Amnion
41 chr8:90849000-90851800 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015