Variant report

Variant rs219185
Chromosome Location chr2:33241667-33241668
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33237600-33246000 Weak transcription Brain Germinal Matrix brain
2 chr2:33238800-33241800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:33238800-33241800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:33238800-33241800 Enhancers Fetal Muscle Leg muscle
5 chr2:33238800-33241800 Enhancers Stomach Mucosa stomach
6 chr2:33239000-33241800 Enhancers Duodenum Mucosa Duodenum
7 chr2:33239000-33241800 Enhancers Small Intestine intestine
8 chr2:33239200-33242200 Enhancers Liver Liver
9 chr2:33239200-33243400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:33239600-33245800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:33239600-33246000 Weak transcription Aorta Aorta
12 chr2:33239600-33246000 Weak transcription Fetal Kidney kidney
13 chr2:33239800-33243200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr2:33239800-33243400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:33239800-33245800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr2:33239800-33245800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr2:33239800-33246000 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:33240000-33245800 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr2:33240000-33246000 Weak transcription NH-A brain
20 chr2:33240200-33243000 Weak transcription HSMMtube muscle
21 chr2:33240400-33244200 Enhancers Fetal Heart heart
22 chr2:33240400-33246000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:33240400-33246400 Weak transcription Stomach Smooth Muscle stomach
24 chr2:33240600-33244200 Enhancers A549 lung
25 chr2:33241200-33242000 Weak transcription Psoas Muscle Psoas
26 chr2:33241200-33242600 Enhancers Right Ventricle heart
27 chr2:33241200-33243000 Weak transcription HepG2 liver
28 chr2:33241200-33248000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:33241200-33249800 Weak transcription Esophagus oesophagus
30 chr2:33241400-33242400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr2:33241400-33242400 Weak transcription Right Atrium heart
32 chr2:33241400-33243000 Weak transcription NHDF-Ad bronchial
33 chr2:33241400-33243200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr2:33241400-33243400 Weak transcription Left Ventricle heart
35 chr2:33241400-33245800 Weak transcription Fetal Intestine Large intestine
36 chr2:33241400-33246200 Weak transcription NHLF lung
37 chr2:33241400-33246800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:33241400-33246800 Weak transcription Muscle Satellite Cultured Cells --
39 chr2:33241400-33246800 Weak transcription Placenta Amnion Placenta Amnion
40 chr2:33241400-33247000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr2:33241400-33247000 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr2:33241600-33242400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr2:33241600-33243400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr2:33241600-33243400 Weak transcription K562 blood
45 chr2:33241600-33246800 Weak transcription Osteobl bone

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