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Variant report
Variant
rs2199377
Chromosome Location
chr11:26314377-26314378
allele
G/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:3)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
(count:3 , 50 per page) page:
1
No.
Transcrition factor
Chromosome Location
Cell Line
Cell type
Cell Stage
Matched TF binding sites
1
CEBPB
chr11:26314271-26314450
Hela-S3
cervix:
n/a
chr11:26314299-26314310
2
CEBPB
chr11:26314230-26314461
A549
lung:
n/a
chr11:26314299-26314310
3
CEBPB
chr11:26314130-26314475
HepG2
liver:
n/a
chr11:26314299-26314310
No data
No data
No data
No data
No data
Variant related genes
Relation type
ENSG00000254819
TF binding region
Extended variants information (count: 2 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv3425701
chr11:26310425-26330495
Enhancers Weak transcription
TF binding regionChromatin interactive region
2 gene(s)
inside rSNPs
diseases
2
esv3337671
chr11:26314226-26316324
Inactive region
TF binding region
1 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links