The 2.0 version of rSNPBase

Variant report

Variant rs2200226
Chromosome Location chr4:53738359-53738360
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53728800-53738400 Weak transcription Small Intestine intestine
2 chr4:53729200-53751200 Weak transcription GM12878-XiMat blood
3 chr4:53729200-53807800 Weak transcription Esophagus oesophagus
4 chr4:53729400-53738600 Weak transcription HMEC breast
5 chr4:53729400-53739200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr4:53729400-53743200 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr4:53729400-53752400 Weak transcription Primary B cells from cord blood blood
8 chr4:53729400-53753800 Weak transcription Duodenum Mucosa Duodenum
9 chr4:53729600-53739400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr4:53729600-53739600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr4:53729600-53742200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr4:53729800-53739400 Weak transcription Fetal Intestine Large intestine
13 chr4:53730000-53743800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr4:53731400-53751000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr4:53731600-53739400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr4:53732400-53750200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr4:53732400-53755000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr4:53732800-53738400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr4:53732800-53739400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr4:53732800-53749400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr4:53733000-53767800 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr4:53733200-53759000 Weak transcription Osteobl bone
23 chr4:53733400-53739200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr4:53733600-53740400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr4:53733600-53750200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr4:53733800-53739200 Weak transcription H9 Cell Line embryonic stem cell
27 chr4:53734000-53738800 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr4:53734000-53739600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr4:53734000-53749200 Weak transcription Aorta Aorta
30 chr4:53734200-53742200 Weak transcription Primary T cells fromperipheralblood blood
31 chr4:53734200-53760800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr4:53734600-53739000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr4:53734600-53739400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:53734600-53822400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr4:53734800-53739000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr4:53735000-53740200 Weak transcription Fetal Kidney kidney
37 chr4:53735000-53770200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr4:53735200-53755200 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr4:53735200-53778000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr4:53735400-53742000 Weak transcription Dnd41 blood
41 chr4:53735600-53739400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr4:53735600-53740400 Weak transcription Lung lung
43 chr4:53735600-53751600 Weak transcription Spleen Spleen
44 chr4:53735800-53739000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:53735800-53739400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr4:53735800-53740000 Weak transcription Pancreas Pancrea
47 chr4:53735800-53772600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr4:53736000-53739200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr4:53736000-53739400 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr4:53736000-53740400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015