Variant report

Variant rs2200285
Chromosome Location chr6:134311963-134311964
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:134276600-134314000 Weak transcription Thymus Thymus
2 chr6:134280600-134312200 Weak transcription Lung lung
3 chr6:134285000-134316600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:134290800-134316400 Weak transcription Esophagus oesophagus
5 chr6:134295000-134313800 Weak transcription Spleen Spleen
6 chr6:134297000-134318000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr6:134299400-134312000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr6:134299400-134313200 Weak transcription Psoas Muscle Psoas
9 chr6:134299400-134313400 Weak transcription Aorta Aorta
10 chr6:134299400-134313800 Weak transcription Right Ventricle heart
11 chr6:134299800-134312000 Weak transcription Rectal Smooth Muscle rectum
12 chr6:134299800-134313600 Weak transcription Fetal Heart heart
13 chr6:134299800-134314000 Weak transcription Fetal Brain Male brain
14 chr6:134300400-134312200 Weak transcription Small Intestine intestine
15 chr6:134300400-134315400 Weak transcription Fetal Intestine Small intestine
16 chr6:134300600-134312000 Weak transcription NHLF lung
17 chr6:134301000-134312400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:134302800-134324000 Weak transcription Fetal Muscle Leg muscle
19 chr6:134303200-134312200 Strong transcription Breast Myoepithelial Primary Cells Breast
20 chr6:134304400-134312000 Weak transcription Colon Smooth Muscle Colon
21 chr6:134304800-134312600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr6:134304800-134313800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr6:134304800-134314400 Weak transcription Brain Hippocampus Middle brain
24 chr6:134304800-134315600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr6:134304800-134324000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:134304800-134331000 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr6:134305000-134314000 Weak transcription Brain Angular Gyrus brain
28 chr6:134305000-134314000 Weak transcription Brain Substantia Nigra brain
29 chr6:134305000-134328400 Weak transcription Fetal Stomach stomach
30 chr6:134305200-134312200 Weak transcription Hela-S3 cervix
31 chr6:134306000-134312000 Weak transcription HepG2 liver
32 chr6:134306000-134312200 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr6:134306000-134324000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:134306000-134324000 Weak transcription Brain Anterior Caudate brain
35 chr6:134306200-134316000 Weak transcription Fetal Intestine Large intestine
36 chr6:134306200-134328000 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr6:134306400-134312400 Weak transcription Colonic Mucosa Colon
38 chr6:134306800-134312000 Strong transcription Primary B cells from cord blood blood
39 chr6:134306800-134314800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr6:134307400-134312200 Weak transcription HSMMtube muscle
41 chr6:134307400-134313800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr6:134307400-134314000 Weak transcription Brain Cingulate Gyrus brain
43 chr6:134307400-134316400 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr6:134307400-134316600 Weak transcription Duodenum Mucosa Duodenum
45 chr6:134307600-134314800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr6:134307800-134313600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr6:134307800-134316800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr6:134307800-134320400 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr6:134308000-134312200 Weak transcription HSMM muscle
50 chr6:134308000-134313800 Weak transcription Stomach Smooth Muscle stomach

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