Variant report

Variant rs2203085
Chromosome Location chr12:59471695-59471696
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:59465800-59478000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr12:59468400-59489000 Weak transcription Esophagus oesophagus
3 chr12:59468600-59473000 Enhancers Fetal Lung lung
4 chr12:59468800-59474200 Enhancers Rectal Mucosa Donor 31 rectum
5 chr12:59469000-59472800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr12:59469400-59471800 Weak transcription Small Intestine intestine
7 chr12:59469600-59471800 Weak transcription Gastric stomach
8 chr12:59469600-59472800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:59470000-59472800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr12:59470000-59474400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr12:59470200-59474400 Enhancers Stomach Mucosa stomach
12 chr12:59470400-59472000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:59470400-59472000 Enhancers Fetal Intestine Large intestine
14 chr12:59470400-59472000 Enhancers Fetal Kidney kidney
15 chr12:59470400-59472400 Enhancers Fetal Intestine Small intestine
16 chr12:59470400-59472400 Enhancers Rectal Mucosa Donor 29 rectum
17 chr12:59470600-59473400 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr12:59470800-59472200 Enhancers Fetal Stomach stomach
19 chr12:59470800-59473200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr12:59471000-59471800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr12:59471000-59472000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr12:59471000-59472000 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr12:59471000-59472000 Enhancers Rectal Smooth Muscle rectum
24 chr12:59471200-59471800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr12:59471200-59471800 Enhancers HUES64 Cell Line embryonic stem cell
26 chr12:59471200-59472000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:59471200-59472000 Enhancers Colon Smooth Muscle Colon
28 chr12:59471200-59472200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr12:59471400-59471800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:59471400-59471800 Enhancers Cortex derived primary cultured neurospheres brain
31 chr12:59471400-59472000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr12:59471400-59472000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr12:59471400-59472000 Enhancers Fetal Muscle Leg muscle
34 chr12:59471400-59472000 Flanking Active TSS NHEK skin
35 chr12:59471400-59472200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr12:59471400-59473000 Enhancers HUVEC blood vessel
37 chr12:59471600-59472000 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr12:59471600-59472000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr12:59471600-59472000 Flanking Active TSS HMEC breast
40 chr12:59471600-59477000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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