Variant report

Variant	rs2203398
Chromosome Location	chr13:79876784-79876785
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10003088	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10009331	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10026138	0.86[ASN][1000 genomes]
rs10026233	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10518293	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12643635	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12647756	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13116239	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13118737	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13129462	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17693611	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1808022	0.86[ASN][1000 genomes]
rs1812170	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1913575	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2138006	0.86[ASN][1000 genomes]
rs2138007	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3108336	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34064898	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34293869	0.87[ASN][1000 genomes]
rs35331814	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs36032817	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs36044367	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs36126235	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3879780	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3879781	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4307031	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4535399	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4540115	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4543206	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4834683	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6811374	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6811375	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6811485	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6811538	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6813853	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6819993	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6837021	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6843909	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6844075	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs71608370	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs71608374	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs71608375	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs71608381	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7662282	0.86[ASN][1000 genomes]
rs7664235	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7665029	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7687884	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9992949	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9993058	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9994451	0.96[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79865000-79893200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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