Variant report

Variant	rs2205162
Chromosome Location	chr14:78736430-78736431
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10145519	0.86[CEU][hapmap];0.86[AMR][1000 genomes]
rs2063985	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4903734	0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61667538	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs880373	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78736600	Weak transcription	Brain Anterior Caudate	brain
2	chr14:78731000-78736600	Weak transcription	Brain Substantia Nigra	brain
3	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
4	chr14:78731400-78736800	Weak transcription	Brain Hippocampus Middle	brain
5	chr14:78731400-78748200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr14:78731600-78737800	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr14:78736400-78736800	Enhancers	Brain Germinal Matrix	brain
8	chr14:78736400-78737400	Weak transcription	Brain Inferior Temporal Lobe	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links