Variant report

Variant	rs2206117
Chromosome Location	chr1:168435184-168435185
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:168434236..168435916-chr1:168440122..168441908,2	K562	blood:
2	chr1:168433780..168435453-chr1:168450998..168452951,2	MCF-7	breast:

rs_ID	r²[population]
rs10158109	0.88[EUR][1000 genomes]
rs11807532	0.81[AFR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61801286	0.88[EUR][1000 genomes]
rs61801287	0.88[EUR][1000 genomes]
rs72703771	0.88[EUR][1000 genomes]
rs72703776	0.89[EUR][1000 genomes]
rs7543621	0.80[AFR][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:168426000-168435200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:168426600-168435200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:168431800-168435200	Weak transcription	Primary T cells from cord blood	blood
4	chr1:168431800-168435200	Weak transcription	Brain Germinal Matrix	brain
5	chr1:168432200-168435200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr1:168433800-168443400	Weak transcription	Liver	Liver
7	chr1:168434000-168435200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr1:168434000-168437000	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr1:168434400-168443600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr1:168434600-168436600	Enhancers	Fetal Muscle Leg	muscle
11	chr1:168434800-168439200	Enhancers	Dnd41	blood
12	chr1:168434800-168440800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr1:168435000-168435200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
14	chr1:168435000-168435200	Enhancers	GM12878-XiMat	blood
15	chr1:168435000-168435400	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr1:168435000-168435600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr1:168435000-168436400	Enhancers	HepG2	liver
18	chr1:168435000-168436600	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr1:168435000-168436800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
20	chr1:168435000-168436800	Enhancers	Primary T killer memory cells from peripheral blood	blood
21	chr1:168435000-168436800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr1:168435000-168437000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
23	chr1:168435000-168437600	Enhancers	Fetal Intestine Small	intestine
24	chr1:168435000-168437800	Enhancers	Fetal Kidney	kidney
25	chr1:168435000-168438400	Enhancers	Primary hematopoietic stem cells	blood
26	chr1:168435000-168438400	Enhancers	Placenta Amnion	Placenta Amnion
27	chr1:168435000-168439600	Enhancers	HSMMtube	muscle
28	chr1:168435000-168440400	Enhancers	Primary T helper cells fromperipheralblood	blood
29	chr1:168435000-168440600	Enhancers	Primary T helper naive cells from peripheral blood	blood
30	chr1:168435000-168440600	Enhancers	Rectal Smooth Muscle	rectum

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