Variant report

Variant rs2213978
Chromosome Location chr16:72984595-72984596
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72966600-72992000 Weak transcription Primary B cells from cord blood blood
2 chr16:72972600-72992000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr16:72973000-72995400 Weak transcription Brain Angular Gyrus brain
4 chr16:72973200-72993800 Weak transcription Primary hematopoietic stem cells blood
5 chr16:72973400-72990800 Weak transcription HUVEC blood vessel
6 chr16:72973400-73006400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr16:72975000-72991800 Weak transcription Hela-S3 cervix
8 chr16:72978800-72984800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr16:72980000-72985000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr16:72980200-72995400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr16:72980400-72997600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr16:72981000-72985000 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr16:72981000-72985000 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr16:72981000-72986200 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr16:72981400-72984800 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr16:72981400-72985000 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr16:72981400-72986400 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr16:72981400-72988400 Weak transcription GM12878-XiMat blood
19 chr16:72981600-72987200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr16:72981800-72985000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr16:72982000-72984800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr16:72982000-72984800 Strong transcription Adipose Nuclei Adipose
23 chr16:72982000-72985000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr16:72982000-72986200 Weak transcription Rectal Smooth Muscle rectum
25 chr16:72982000-72986200 Weak transcription Stomach Mucosa stomach
26 chr16:72982200-72984800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr16:72982200-72984800 Strong transcription A549 lung
28 chr16:72982200-72984800 Strong transcription HSMM muscle
29 chr16:72982200-72984800 Strong transcription HSMMtube muscle
30 chr16:72982200-72985000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr16:72982200-72985000 Strong transcription Fetal Muscle Trunk muscle
32 chr16:72982200-72985000 Strong transcription Osteobl bone
33 chr16:72982200-72985800 Weak transcription Psoas Muscle Psoas
34 chr16:72982200-72986000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr16:72982200-72993000 Weak transcription Fetal Brain Male brain
36 chr16:72982200-72996200 Weak transcription Small Intestine intestine
37 chr16:72982400-72984600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr16:72982400-72984800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr16:72982400-72984800 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr16:72982400-72985000 Strong transcription Muscle Satellite Cultured Cells --
41 chr16:72982400-72985000 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr16:72982400-72985200 Strong transcription Fetal Muscle Leg muscle
43 chr16:72982400-72987200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr16:72982600-72985000 Strong transcription Primary monocytes fromperipheralblood blood
45 chr16:72982600-72985000 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr16:72982600-72985000 Strong transcription Fetal Lung lung
47 chr16:72982600-72985000 Strong transcription Placenta Placenta
48 chr16:72982600-72985000 Strong transcription Right Ventricle heart
49 chr16:72982600-72985000 Strong transcription NHLF lung
50 chr16:72982600-72985200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

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