Variant report

Variant	rs2221681
Chromosome Location	chr4:127402089-127402090
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10016992	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11723191	0.86[ASN][1000 genomes]
rs11730363	0.86[ASN][1000 genomes]
rs13148837	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1396525	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1463970	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1508988	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35919308	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs72690214	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9996216	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879906	chr4:127354073-127414252	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv595385	chr4:127383473-127451806	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127392200-127413200	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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