Variant report

Variant rs2228508
Chromosome Location chr21:16337661-16337662
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:16315600-16338000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr21:16322400-16339200 Weak transcription Pancreas Pancrea
3 chr21:16328200-16338800 Weak transcription HUVEC blood vessel
4 chr21:16328800-16339400 Weak transcription Ovary ovary
5 chr21:16328800-16341600 Weak transcription Hela-S3 cervix
6 chr21:16329000-16338000 Weak transcription Placenta Placenta
7 chr21:16329600-16338400 Weak transcription Stomach Smooth Muscle stomach
8 chr21:16329600-16338800 Weak transcription Rectal Smooth Muscle rectum
9 chr21:16330400-16338600 Weak transcription NHLF lung
10 chr21:16331000-16337800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr21:16331000-16338600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr21:16331000-16338600 Weak transcription Brain Hippocampus Middle brain
13 chr21:16331000-16338800 Weak transcription Colon Smooth Muscle Colon
14 chr21:16331400-16339200 Weak transcription Brain Substantia Nigra brain
15 chr21:16331400-16339600 Weak transcription Placenta Amnion Placenta Amnion
16 chr21:16331600-16338000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr21:16331600-16341800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr21:16331800-16340200 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr21:16332200-16338000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr21:16333400-16338600 Weak transcription Small Intestine intestine
21 chr21:16334000-16338400 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr21:16334200-16337800 Weak transcription NHEK skin
23 chr21:16334200-16338200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr21:16334200-16338400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr21:16334400-16338200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr21:16334400-16338400 Weak transcription GM12878-XiMat blood
27 chr21:16334400-16338600 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr21:16334400-16339600 Weak transcription Right Ventricle heart
29 chr21:16334400-16342400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr21:16334600-16338400 Weak transcription Primary B cells from peripheral blood blood
31 chr21:16334600-16338600 Weak transcription Muscle Satellite Cultured Cells --
32 chr21:16334600-16338600 Weak transcription Fetal Brain Female brain
33 chr21:16334600-16339200 Weak transcription NHDF-Ad bronchial
34 chr21:16334800-16342400 Strong transcription Primary hematopoietic stem cells blood
35 chr21:16335000-16338400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr21:16335000-16340000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr21:16335200-16338400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr21:16335400-16338000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr21:16335400-16338400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr21:16335400-16340000 Strong transcription HMEC breast
41 chr21:16335400-16340800 Strong transcription NH-A brain
42 chr21:16335400-16341400 Strong transcription Fetal Thymus thymus
43 chr21:16335600-16337800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr21:16335600-16341200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr21:16335600-16341400 Strong transcription Fetal Intestine Large intestine
46 chr21:16335600-16342600 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr21:16335800-16338400 Weak transcription Adipose Nuclei Adipose
48 chr21:16335800-16338800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr21:16335800-16339000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr21:16335800-16340800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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