Variant report

Variant rs2229699
Chromosome Location chr6:31548856-31548857
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31547600-31549400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
2 chr6:31547600-31549600 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
3 chr6:31547800-31550600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
4 chr6:31547800-31551000 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr6:31547800-31551000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
6 chr6:31548000-31549000 Active TSS Osteobl bone
7 chr6:31548000-31549400 Active TSS Brain Inferior Temporal Lobe brain
8 chr6:31548000-31549600 Active TSS Brain Angular Gyrus brain
9 chr6:31548000-31549600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr6:31548000-31550800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr6:31548000-31550800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
12 chr6:31548000-31550800 Active TSS Rectal Smooth Muscle rectum
13 chr6:31548200-31549000 Active TSS Fetal Brain Female brain
14 chr6:31548200-31549400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr6:31548200-31549400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr6:31548200-31549400 Active TSS Duodenum Smooth Muscle Duodenum
17 chr6:31548200-31549600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
18 chr6:31548200-31549600 Active TSS Colon Smooth Muscle Colon
19 chr6:31548200-31549800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:31548200-31550000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
21 chr6:31548200-31550000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
22 chr6:31548200-31550200 Active TSS H9 Cell Line embryonic stem cell
23 chr6:31548200-31550200 Active TSS Primary T killer memory cells from peripheral blood blood
24 chr6:31548200-31550200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:31548200-31550200 Flanking Active TSS Liver Liver
26 chr6:31548200-31550200 Active TSS Small Intestine intestine
27 chr6:31548200-31550200 Flanking Active TSS Stomach Smooth Muscle stomach
28 chr6:31548200-31550400 Active TSS Primary T helper naive cells from peripheral blood blood
29 chr6:31548200-31550400 Active TSS Primary T killer naive cells fromperipheralblood blood
30 chr6:31548200-31550600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
31 chr6:31548200-31550600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
32 chr6:31548400-31549000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
33 chr6:31548400-31549000 Transcr. at gene 5' and 3' Right Atrium heart
34 chr6:31548400-31549200 Active TSS Primary T helper cells fromperipheralblood blood
35 chr6:31548400-31549200 Active TSS NHLF lung
36 chr6:31548400-31549400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr6:31548400-31549400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr6:31548400-31549400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
39 chr6:31548400-31549400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr6:31548400-31549400 Active TSS Brain Anterior Caudate brain
41 chr6:31548400-31549400 Active TSS Brain Substantia Nigra brain
42 chr6:31548400-31549400 Bivalent/Poised TSS Fetal Intestine Large intestine
43 chr6:31548400-31549400 Active TSS Gastric stomach
44 chr6:31548400-31549400 Active TSS Sigmoid Colon Sigmoid Colon
45 chr6:31548400-31549400 Active TSS NHDF-Ad bronchial
46 chr6:31548400-31549400 Active TSS NHEK skin
47 chr6:31548400-31549600 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:31548400-31549600 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
49 chr6:31548400-31549600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
50 chr6:31548400-31549600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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