Variant report

Variant rs2229879
Chromosome Location chr4:144359688-144359689
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144318200-144362400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr4:144327800-144361200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:144327800-144388200 Weak transcription HepG2 liver
4 chr4:144333000-144364600 Weak transcription NHEK skin
5 chr4:144333400-144362400 Weak transcription NH-A brain
6 chr4:144333600-144359800 Weak transcription HSMMtube muscle
7 chr4:144336400-144392200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr4:144339400-144394600 Weak transcription Colonic Mucosa Colon
9 chr4:144342000-144382000 Weak transcription Fetal Kidney kidney
10 chr4:144342600-144359800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr4:144344000-144363000 Weak transcription Spleen Spleen
12 chr4:144347000-144382600 Weak transcription Gastric stomach
13 chr4:144351600-144365000 Weak transcription NHLF lung
14 chr4:144352400-144382200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr4:144353000-144365400 Weak transcription Small Intestine intestine
16 chr4:144353200-144398600 Weak transcription Brain Germinal Matrix brain
17 chr4:144353600-144361200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr4:144353600-144363000 Weak transcription H1 Cell Line embryonic stem cell
19 chr4:144353600-144400000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr4:144354600-144364000 Strong transcription Primary B cells from cord blood blood
21 chr4:144355200-144361400 Weak transcription Brain Angular Gyrus brain
22 chr4:144355200-144382400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr4:144355600-144388200 Weak transcription Primary B cells from peripheral blood blood
24 chr4:144355800-144362600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr4:144356000-144371600 Weak transcription Fetal Intestine Small intestine
26 chr4:144357200-144359800 ZNF genes & repeats Primary hematopoietic stem cells blood
27 chr4:144357400-144360000 Strong transcription Left Ventricle heart
28 chr4:144357400-144360400 Strong transcription Fetal Muscle Leg muscle
29 chr4:144357400-144360400 Strong transcription Ovary ovary
30 chr4:144357400-144362200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr4:144357400-144363200 Strong transcription Fetal Intestine Large intestine
32 chr4:144357600-144359800 Strong transcription Fetal Heart heart
33 chr4:144357600-144362000 Strong transcription Skeletal Muscle Female skeletal muscle
34 chr4:144357800-144365000 Weak transcription Muscle Satellite Cultured Cells --
35 chr4:144358000-144362600 Strong transcription Placenta Placenta
36 chr4:144358000-144366800 Weak transcription Thymus Thymus
37 chr4:144358200-144387000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr4:144358400-144361400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr4:144358400-144362600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr4:144358400-144363400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr4:144358400-144384400 Weak transcription HSMM muscle
42 chr4:144358600-144360200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr4:144358600-144362000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr4:144358600-144362600 Strong transcription Fetal Lung lung
45 chr4:144358800-144359800 Strong transcription Right Ventricle heart
46 chr4:144358800-144362200 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr4:144358800-144362400 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr4:144358800-144362600 Strong transcription Liver Liver
49 chr4:144359000-144360000 Strong transcription Brain Anterior Caudate brain
50 chr4:144359000-144360200 Strong transcription Fetal Stomach stomach

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