Variant report

Variant rs2236454
Chromosome Location chr21:46893285-46893286
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46882800-46899000 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr21:46885400-46894400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr21:46888800-46893400 Enhancers Brain Cingulate Gyrus brain
4 chr21:46890000-46893800 Enhancers Fetal Muscle Trunk muscle
5 chr21:46890000-46894200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr21:46890200-46893800 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr21:46890200-46894000 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr21:46890200-46894000 Weak transcription K562 blood
9 chr21:46891200-46894200 Weak transcription Lung lung
10 chr21:46891200-46897800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr21:46891400-46894000 Bivalent Enhancer Fetal Stomach stomach
12 chr21:46891400-46896400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr21:46891600-46894000 Weak transcription Gastric stomach
14 chr21:46891600-46894400 Weak transcription Thymus Thymus
15 chr21:46891600-46896400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr21:46891600-46896800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr21:46891600-46897400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr21:46891600-46899800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr21:46891800-46893400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr21:46891800-46893600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr21:46891800-46894000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr21:46891800-46894000 Weak transcription Primary T cells from cord blood blood
23 chr21:46891800-46894200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr21:46891800-46894200 Weak transcription Fetal Kidney kidney
25 chr21:46891800-46896400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr21:46891800-46896600 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr21:46891800-46896800 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr21:46891800-46897200 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr21:46891800-46897800 Weak transcription Rectal Smooth Muscle rectum
30 chr21:46891800-46897800 Weak transcription Right Atrium heart
31 chr21:46891800-46898200 Weak transcription Colon Smooth Muscle Colon
32 chr21:46891800-46906400 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr21:46892000-46894000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr21:46892000-46894400 Weak transcription Aorta Aorta
35 chr21:46892000-46894800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr21:46892000-46896200 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr21:46892000-46897400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr21:46892000-46897800 Weak transcription Placenta Amnion Placenta Amnion
39 chr21:46892000-46898000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr21:46892000-46898200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr21:46892000-46898200 Weak transcription Osteobl bone
42 chr21:46892000-46898800 Weak transcription NHDF-Ad bronchial
43 chr21:46892000-46904000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr21:46892200-46893600 Weak transcription A549 lung
45 chr21:46892200-46893800 Weak transcription NHEK skin
46 chr21:46892200-46894400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr21:46892200-46894600 Weak transcription HUVEC blood vessel
48 chr21:46892200-46897800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr21:46892200-46898000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr21:46892200-46898000 Weak transcription Muscle Satellite Cultured Cells --

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