Variant report

Variant rs2236979
Chromosome Location chr3:50486895-50486896
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50465800-50487000 Weak transcription Fetal Intestine Small intestine
2 chr3:50474000-50487400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr3:50479800-50487800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr3:50481200-50487000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:50481200-50487000 Weak transcription Right Ventricle heart
6 chr3:50481400-50487800 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr3:50481800-50488200 Weak transcription Brain Inferior Temporal Lobe brain
8 chr3:50482200-50487400 Weak transcription Brain Angular Gyrus brain
9 chr3:50482200-50487400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr3:50482200-50493400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr3:50483800-50487400 Weak transcription Fetal Muscle Leg muscle
12 chr3:50483800-50488600 Enhancers Lung lung
13 chr3:50484000-50500800 Weak transcription Pancreas Pancrea
14 chr3:50484200-50487200 Enhancers Primary T cells fromperipheralblood blood
15 chr3:50484600-50487000 Weak transcription Fetal Stomach stomach
16 chr3:50485000-50487000 Weak transcription Gastric stomach
17 chr3:50485200-50488000 Enhancers Fetal Lung lung
18 chr3:50485200-50488000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr3:50485600-50487200 Enhancers Primary T helper cells PMA-I stimulated --
20 chr3:50485600-50487200 Weak transcription Fetal Intestine Large intestine
21 chr3:50485600-50487200 Weak transcription Stomach Mucosa stomach
22 chr3:50485800-50487000 Weak transcription Primary monocytes fromperipheralblood blood
23 chr3:50485800-50487000 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr3:50485800-50487200 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr3:50486000-50487200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr3:50486000-50487800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr3:50486000-50488200 Enhancers Fetal Kidney kidney
28 chr3:50486200-50487400 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr3:50486200-50487400 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr3:50486400-50487000 Enhancers Primary T killer memory cells from peripheral blood blood
31 chr3:50486400-50488400 Enhancers HUES6 Cell Line embryonic stem cell
32 chr3:50486600-50487000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
33 chr3:50486600-50487200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr3:50486600-50487200 Enhancers Primary T helper cells fromperipheralblood blood
35 chr3:50486600-50487400 Enhancers HepG2 liver
36 chr3:50486600-50487800 Enhancers Brain Anterior Caudate brain
37 chr3:50486600-50488400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr3:50486600-50488400 Enhancers Spleen Spleen
39 chr3:50486600-50488600 Enhancers Primary hematopoietic stem cells blood
40 chr3:50486600-50488600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr3:50486800-50487000 Enhancers ES-WA7 Cell Line embryonic stem cell
42 chr3:50486800-50487400 Enhancers H9 Cell Line embryonic stem cell
43 chr3:50486800-50487400 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr3:50486800-50487400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr3:50486800-50487600 Enhancers Colonic Mucosa Colon
46 chr3:50486800-50488200 Enhancers Primary B cells from peripheral blood blood
47 chr3:50486800-50488400 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr3:50486800-50488400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr3:50486800-50488800 Enhancers Fetal Thymus thymus

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