Variant report

Variant rs2246618
Chromosome Location chr6:31478986-31478987
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31466800-31481200 Weak transcription NHDF-Ad bronchial
2 chr6:31467000-31480600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr6:31467200-31481200 Weak transcription Liver Liver
4 chr6:31467400-31506600 Weak transcription Right Atrium heart
5 chr6:31467600-31481000 Weak transcription HSMM muscle
6 chr6:31467600-31481400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr6:31468600-31481600 Weak transcription Left Ventricle heart
8 chr6:31472600-31479400 Strong transcription Dnd41 blood
9 chr6:31472800-31479200 Strong transcription H9 Cell Line embryonic stem cell
10 chr6:31472800-31479400 Strong transcription Primary B cells from peripheral blood blood
11 chr6:31472800-31479400 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr6:31472800-31479400 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr6:31472800-31479400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:31472800-31479600 Strong transcription GM12878-XiMat blood
15 chr6:31472800-31479800 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr6:31472800-31480000 Weak transcription Small Intestine intestine
17 chr6:31473000-31479200 Strong transcription Primary monocytes fromperipheralblood blood
18 chr6:31473000-31479400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr6:31473000-31479400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr6:31473000-31479400 Strong transcription Duodenum Mucosa Duodenum
21 chr6:31473000-31479400 Strong transcription Sigmoid Colon Sigmoid Colon
22 chr6:31473000-31479400 Strong transcription Spleen Spleen
23 chr6:31473200-31479200 Strong transcription Primary T cells fromperipheralblood blood
24 chr6:31473200-31479400 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr6:31473200-31479600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr6:31473200-31479800 Strong transcription Primary neutrophils fromperipheralblood blood
27 chr6:31473400-31479200 Strong transcription Primary T cells from cord blood blood
28 chr6:31473400-31479200 Strong transcription Primary T helper naive cells fromperipheralblood blood
29 chr6:31473400-31479400 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr6:31473400-31479400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:31473400-31479400 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr6:31473400-31479400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr6:31473400-31479400 Strong transcription Fetal Thymus thymus
34 chr6:31473400-31479400 Strong transcription Thymus Thymus
35 chr6:31473400-31480400 Weak transcription Brain Anterior Caudate brain
36 chr6:31473600-31479000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr6:31473600-31479400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr6:31473800-31479400 Strong transcription Lung lung
39 chr6:31474000-31479200 Strong transcription Hela-S3 cervix
40 chr6:31474000-31481800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr6:31474200-31479000 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr6:31474200-31479200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:31474200-31479400 Strong transcription NHLF lung
44 chr6:31474600-31479200 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr6:31474800-31479600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr6:31475000-31480200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr6:31475200-31480800 Weak transcription Rectal Smooth Muscle rectum
48 chr6:31475800-31480000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr6:31475800-31481400 Weak transcription Pancreas Pancrea
50 chr6:31475800-31482800 Weak transcription Right Ventricle heart

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