Variant report

Variant	rs2257543
Chromosome Location	chr3:195681385-195681386
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:195681262-195681462	ECC-1	luminal epithelium:	n/a	n/a
2	USF1	chr3:195681240-195681723	A549	lung:	n/a	chr3:195681296-195681312 chr3:195681304-195681320
3	IRF1	chr3:195681354-195681583	K562	blood:	n/a	n/a
4	E2F1	chr3:195681206-195681658	Hela-S3	cervix:	n/a	chr3:195681298-195681307
5	POLR2A	chr3:195681106-195681944	HepG2	liver:	n/a	n/a
6	POLR2A	chr3:195681191-195681881	GM12892	blood:	n/a	n/a
7	POLR2A	chr3:195681155-195681932	H1-hESC	embryonic stem cell:	n/a	n/a
8	ELF1	chr3:195681289-195681494	HepG2	liver:	n/a	chr3:195681456-195681465 chr3:195681416-195681429 chr3:195681418-195681427
9	MAX	chr3:195681278-195681475	K562	blood:	n/a	n/a
10	TAF1	chr3:195681173-195681989	A549	lung:	n/a	n/a
11	POLR2A	chr3:195679501-195682054	GM12878	blood:	n/a	n/a
12	ZBTB33	chr3:195681109-195681702	K562	blood:	n/a	chr3:195681514-195681524
13	POU2F2	chr3:195681084-195682628	GM12891	blood:	n/a	n/a
14	MAX	chr3:195681309-195681522	SK-N-SH	brain:	n/a	n/a
15	POLR2A	chr3:195681172-195681896	U87	brain:	n/a	n/a
16	ZEB1	chr3:195681294-195681542	GM12878	blood:	n/a	n/a
17	USF1	chr3:195681146-195681806	A549	lung:	n/a	chr3:195681296-195681312 chr3:195681304-195681320
18	TBL1XR1	chr3:195681384-195681558	GM12878	blood:	n/a	n/a
19	E2F6	chr3:195681288-195681455	K562	blood:	n/a	chr3:195681298-195681307
20	RXRA	chr3:195681230-195681826	GM12878	blood:	n/a	n/a
21	TBL1XR1	chr3:195681360-195681577	K562	blood:	n/a	n/a
22	TBL1XR1	chr3:195681385-195681409	K562	blood:	n/a	n/a
23	MAX	chr3:195681304-195681516	HepG2	liver:	n/a	n/a
24	NFIC	chr3:195681169-195681671	GM12878	blood:	n/a	n/a
25	POLR2A	chr3:195681217-195681683	Hela-S3	cervix:	n/a	n/a
26	JUN	chr3:195681277-195681514	K562	blood:	n/a	n/a
27	GABPA	chr3:195681083-195681933	HepG2	liver:	n/a	chr3:195681513-195681522 chr3:195681298-195681307
28	POLR2A	chr3:195681192-195681715	GM12891	blood:	n/a	n/a
29	GABPA	chr3:195681178-195681923	Hela-S3	cervix:	n/a	chr3:195681513-195681522 chr3:195681298-195681307
30	SRF	chr3:195681315-195681525	GM12878	blood:	n/a	n/a
31	CTCF	chr3:195681246-195681450	K562	blood:	n/a	chr3:195681300-195681313
32	EP300	chr3:195681357-195681573	K562	blood:	n/a	chr3:195681454-195681470
33	NRF1	chr3:195681348-195681723	SK-N-SH	brain:	n/a	chr3:195681513-195681522
34	POLR2A	chr3:195681107-195682005	PFSK-1	brain:	n/a	n/a
35	IRF4	chr3:195681121-195682047	GM12878	blood:	n/a	n/a
36	PBX3	chr3:195681216-195681399	GM12878	blood:	n/a	n/a
37	TAF1	chr3:195681290-195681529	SK-N-SH	brain:	n/a	n/a
38	HA-E2F1	chr3:195681193-195681667	Hela-S3	cervix:	n/a	chr3:195681298-195681307
39	POLR2A	chr3:195681189-195681716	HepG2	liver:	n/a	n/a
40	GABPA	chr3:195681297-195681585	MCF-7	breast:	n/a	chr3:195681513-195681522 chr3:195681298-195681307
41	ELF1	chr3:195681248-195681789	GM12878	blood:	n/a	chr3:195681456-195681465 chr3:195681416-195681429 chr3:195681418-195681427
42	ELK1	chr3:195681291-195681626	GM12878	blood:	n/a	n/a
43	RUNX3	chr3:195681272-195681569	GM12878	blood:	n/a	n/a
44	MAX	chr3:195681340-195681563	SK-N-SH	brain:	n/a	n/a
45	YY1	chr3:195681272-195681481	K562	blood:	n/a	chr3:195681296-195681310 chr3:195681369-195681380
46	REST	chr3:195681144-195682108	SK-N-SH	brain:	n/a	chr3:195681306-195681319
47	POLR2A	chr3:195681242-195681582	ProgFib	skin:	n/a	n/a
48	POLR2A	chr3:195681191-195681717	MCF10A-Er-Src	breast:	n/a	n/a
49	TAF7	chr3:195681300-195681448	K562	blood:	n/a	n/a
50	POLR2A	chr3:195681226-195681573	IMR90	lung:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:195361732..195362263-chr3:195681373..195681896,2	MCF-7	breast:
2	chr3:195679874..195682569-chr3:197381110..197382679,2	K562	blood:
3	chr3:195620748..195623055-chr3:195679886..195681403,2	K562	blood:
4	chr3:195679870..195682569-chr3:197379763..197382610,2	K562	blood:
5	chr3:195636473..195638760-chr3:195679951..195681488,2	MCF-7	breast:
6	chr3:195639677..195641924-chr3:195679365..195681428,2	MCF-7	breast:
7	chr3:195620748..195623057-chr3:195678515..195681386,2	K562	blood:
8	chr3:195645901..195648267-chr3:195679890..195681479,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000260261	TF binding region
ENSG00000266730	Chromatin interaction
ENSG00000273009	Chromatin interaction
ENSG00000061938	Chromatin interaction

Extended variants
information (count: 53 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:53 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
3	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
5	nsv1006165	chr3:195383130-195777211	Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
6	nsv471621	chr3:195417664-195795474	Flanking Active TSS Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
7	esv2756651	chr3:195433543-195696720	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
8	nsv432528	chr3:195433543-195696720	Enhancers Strong transcription ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
9	esv2754016	chr3:195433543-195753766	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
10	nsv822410	chr3:195438740-195725565	Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
11	nsv1005193	chr3:195526571-195709662	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
12	nsv530397	chr3:195565159-195740416	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
13	nsv1002629	chr3:195582468-195769275	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
14	nsv829827	chr3:195608866-195760829	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
15	nsv469518	chr3:195623722-195795474	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
16	nsv482784	chr3:195623722-195795474	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
17	nsv1010395	chr3:195641908-195848264	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
18	nsv532213	chr3:195643944-196063636	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
19	nsv967107	chr3:195648362-195697515	Strong transcription Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
20	nsv10385	chr3:195650964-195739806	Enhancers Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
21	esv1822059	chr3:195651349-195776737	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
22	esv1844691	chr3:195651349-195776737	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
23	esv1820982	chr3:195651349-195835519	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
24	nsv997797	chr3:195658360-196212958	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
25	esv3362647	chr3:195661755-195684553	Weak transcription Active TSS Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
26	esv17805	chr3:195662762-195733839	Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
27	nsv820779	chr3:195662762-195733839	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
28	esv1849611	chr3:195662864-195736134	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
29	esv3487234	chr3:195664550-195724142	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
30	esv3487235	chr3:195664550-195724142	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
31	esv1845231	chr3:195664641-195724169	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
32	esv1846114	chr3:195664641-195734827	Active TSS Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
33	esv3330575	chr3:195665155-195681853	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
34	esv1819244	chr3:195665342-195740346	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
35	esv1844122	chr3:195665730-195715178	Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
36	esv3515192	chr3:195668506-195727998	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
37	esv3515193	chr3:195668506-195727998	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
38	esv3500060	chr3:195668635-195727950	Strong transcription Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
39	esv3500059	chr3:195668717-195728000	Strong transcription Weak transcription Genic enhancers Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
40	esv1845402	chr3:195672244-195723617	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
41	esv20134	chr3:195673006-195720655	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
42	esv3394221	chr3:195673455-195681753	Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	n/a
43	esv3512247	chr3:195674252-195722317	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
44	esv3512248	chr3:195674252-195722317	Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
45	esv3331676	chr3:195674350-195722846	Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
46	esv3347381	chr3:195675155-195681753	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	n/a
47	esv3374493	chr3:195675655-195681853	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	n/a
48	esv3323403	chr3:195675655-195682453	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	n/a
49	esv1848667	chr3:195675779-195722758	Genic enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
50	nsv511234	chr3:195677895-195717746	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195657800-195681400	Weak transcription	GM12878-XiMat	blood
2	chr3:195659600-195685600	Weak transcription	Small Intestine	intestine
3	chr3:195663800-195682000	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr3:195665200-195691800	Weak transcription	HSMMtube	muscle
5	chr3:195665400-195681400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr3:195665400-195685200	Weak transcription	Aorta	Aorta
7	chr3:195667400-195681400	Weak transcription	Primary B cells from peripheral blood	blood
8	chr3:195667400-195681400	Weak transcription	Brain Substantia Nigra	brain
9	chr3:195667400-195684200	Weak transcription	Spleen	Spleen
10	chr3:195667400-195686200	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr3:195667600-195681400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr3:195667600-195681600	Weak transcription	Fetal Intestine Large	intestine
13	chr3:195668200-195682200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr3:195671800-195681600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr3:195677600-195681400	Weak transcription	Fetal Muscle Trunk	muscle
16	chr3:195677800-195691800	Weak transcription	NHDF-Ad	bronchial
17	chr3:195678000-195681400	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr3:195678000-195696200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
19	chr3:195678600-195681400	Weak transcription	Fetal Thymus	thymus
20	chr3:195678600-195681600	Weak transcription	Fetal Intestine Small	intestine
21	chr3:195678800-195681400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr3:195678800-195681400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
23	chr3:195678800-195681400	Weak transcription	NHEK	skin
24	chr3:195679000-195691600	Weak transcription	Primary T helper cells PMA-I stimulated	--
25	chr3:195679000-195695800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr3:195680600-195681800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr3:195680600-195681800	Active TSS	Primary neutrophils fromperipheralblood	blood
28	chr3:195680600-195681800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr3:195680600-195681800	Active TSS	Pancreas	Pancrea
30	chr3:195680600-195681800	Active TSS	Monocytes-CD14+_RO01746	blood
31	chr3:195680600-195682600	Active TSS	Hela-S3	cervix
32	chr3:195680600-195682800	Active TSS	HUES48 Cell Line	embryonic stem cell
33	chr3:195680600-195682800	Active TSS	iPS-18 Cell Line	embryonic stem cell
34	chr3:195680800-195681800	Active TSS	Psoas Muscle	Psoas
35	chr3:195680800-195681800	Active TSS	Right Atrium	heart
36	chr3:195680800-195681800	Active TSS	Right Ventricle	heart
37	chr3:195680800-195681800	Active TSS	Thymus	Thymus
38	chr3:195680800-195682400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr3:195681000-195681600	Active TSS	Dnd41	blood
40	chr3:195681000-195681800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
41	chr3:195681000-195681800	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
42	chr3:195681000-195682000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr3:195681000-195682000	Active TSS	Primary T helper naive cells fromperipheralblood	blood
44	chr3:195681000-195682000	Active TSS	Primary T helper cells fromperipheralblood	blood
45	chr3:195681000-195682200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr3:195681000-195682200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr3:195681000-195682200	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr3:195681000-195682200	Active TSS	Brain Germinal Matrix	brain
49	chr3:195681000-195682200	Active TSS	Fetal Brain Female	brain
50	chr3:195681000-195682200	Active TSS	Ovary	ovary

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