The 2.0 version of rSNPBase

Variant report

Variant rs2263969
Chromosome Location chr2:190576922-190576923
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540200-190578000 Weak transcription Fetal Brain Male brain
2 chr2:190540800-190592600 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
5 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
6 chr2:190550600-190579000 Weak transcription Spleen Spleen
7 chr2:190550800-190577600 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr2:190550800-190578400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:190550800-190579000 Weak transcription Fetal Thymus thymus
10 chr2:190550800-190579400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr2:190550800-190591400 Weak transcription Primary T cells fromperipheralblood blood
12 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:190550800-190626800 Weak transcription Right Ventricle heart
14 chr2:190551200-190603400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr2:190551200-190617000 Weak transcription HSMM muscle
16 chr2:190555600-190593000 Weak transcription Fetal Lung lung
17 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
18 chr2:190563400-190607800 Weak transcription Primary T cells from cord blood blood
19 chr2:190563600-190593200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:190563600-190608400 Weak transcription Brain Anterior Caudate brain
21 chr2:190563600-190611800 Weak transcription Brain Substantia Nigra brain
22 chr2:190563600-190612600 Weak transcription Brain Inferior Temporal Lobe brain
23 chr2:190564000-190593200 Weak transcription Liver Liver
24 chr2:190564400-190578200 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:190564800-190577800 Weak transcription Stomach Mucosa stomach
26 chr2:190568200-190594200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:190568200-190611600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr2:190571600-190606800 Weak transcription Primary B cells from cord blood blood
29 chr2:190571600-190607800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr2:190571600-190608400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr2:190571600-190612400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr2:190571800-190608600 Weak transcription Duodenum Mucosa Duodenum
33 chr2:190572000-190608400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr2:190573000-190578400 Weak transcription Osteobl bone
35 chr2:190573000-190606600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr2:190573000-190611000 Weak transcription Stomach Smooth Muscle stomach
37 chr2:190574600-190579800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr2:190575000-190615800 Weak transcription Fetal Kidney kidney
39 chr2:190575200-190577800 Weak transcription Colonic Mucosa Colon
40 chr2:190575400-190577000 Strong transcription Fetal Intestine Large intestine
41 chr2:190576200-190577200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:190576200-190577200 ZNF genes & repeats Fetal Intestine Small intestine
43 chr2:190576400-190577000 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr2:190576400-190577000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:190576400-190577000 Strong transcription Aorta Aorta
46 chr2:190576400-190577000 Strong transcription Ovary ovary
47 chr2:190576400-190577200 Strong transcription Left Ventricle heart
48 chr2:190576600-190577200 ZNF genes & repeats Fetal Stomach stomach
49 chr2:190576600-190578200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr2:190576600-190585000 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015