The 2.0 version of rSNPBase

Variant report

Variant rs2264960
Chromosome Location chr1:62612176-62612177
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62508200-62628400 Weak transcription Colonic Mucosa Colon
2 chr1:62536200-62619400 Weak transcription Rectal Smooth Muscle rectum
3 chr1:62548400-62629800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:62551800-62614000 Weak transcription Primary T cells from cord blood blood
5 chr1:62554200-62614000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:62563600-62617400 Weak transcription Brain Anterior Caudate brain
7 chr1:62566200-62614000 Weak transcription Adipose Nuclei Adipose
8 chr1:62576600-62618000 Weak transcription Psoas Muscle Psoas
9 chr1:62580200-62617200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:62588600-62622600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:62593200-62621800 Weak transcription Primary hematopoietic stem cells blood
12 chr1:62593400-62617600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:62593600-62636200 Weak transcription Spleen Spleen
14 chr1:62594400-62614800 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr1:62595000-62612600 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:62595200-62614200 Weak transcription Stomach Smooth Muscle stomach
17 chr1:62595200-62625200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr1:62595400-62614000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:62596000-62614000 Weak transcription Left Ventricle heart
20 chr1:62596000-62617800 Weak transcription Aorta Aorta
21 chr1:62596200-62614200 Weak transcription Ovary ovary
22 chr1:62598600-62614000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:62598800-62612600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:62599000-62616000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:62602800-62614000 Weak transcription HMEC breast
26 chr1:62603000-62614200 Weak transcription Primary T cells fromperipheralblood blood
27 chr1:62603800-62613800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr1:62603800-62617200 Weak transcription Fetal Muscle Leg muscle
29 chr1:62603800-62617400 Weak transcription Gastric stomach
30 chr1:62603800-62617800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:62604000-62614000 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr1:62604000-62614000 Weak transcription Duodenum Mucosa Duodenum
33 chr1:62604600-62617800 Weak transcription Esophagus oesophagus
34 chr1:62605000-62631800 Weak transcription Lung lung
35 chr1:62605200-62614000 Weak transcription Liver Liver
36 chr1:62605200-62622400 Weak transcription Fetal Brain Female brain
37 chr1:62605200-62624400 Weak transcription Right Atrium heart
38 chr1:62605400-62613800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:62606000-62612600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:62606000-62617400 Weak transcription A549 lung
41 chr1:62606400-62628600 Weak transcription Stomach Mucosa stomach
42 chr1:62606800-62614000 Weak transcription Fetal Stomach stomach
43 chr1:62607000-62612600 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:62607000-62630000 Weak transcription Placenta Amnion Placenta Amnion
45 chr1:62608000-62618800 Weak transcription Brain Germinal Matrix brain
46 chr1:62608400-62613200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:62608400-62614000 Weak transcription Right Ventricle heart
48 chr1:62608400-62614000 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:62608400-62617600 Weak transcription Colon Smooth Muscle Colon
50 chr1:62608400-62618800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015