The 2.0 version of rSNPBase

Variant report

Variant rs2269992
Chromosome Location chr7:79090600-79090601
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:79084200-79091200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr7:79084400-79095000 Weak transcription Primary hematopoietic stem cells blood
3 chr7:79084400-79102200 Weak transcription Left Ventricle heart
4 chr7:79084600-79101000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr7:79084800-79091000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr7:79084800-79100800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr7:79084800-79102800 Weak transcription HSMM muscle
8 chr7:79085000-79098600 Weak transcription Fetal Muscle Leg muscle
9 chr7:79085000-79099600 Weak transcription Fetal Stomach stomach
10 chr7:79085200-79091800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr7:79085800-79090800 Weak transcription Muscle Satellite Cultured Cells --
12 chr7:79085800-79095400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr7:79085800-79098000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr7:79086000-79099800 Weak transcription Stomach Smooth Muscle stomach
15 chr7:79086200-79093800 Weak transcription Brain Substantia Nigra brain
16 chr7:79086400-79090600 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr7:79086600-79099600 Weak transcription Brain Inferior Temporal Lobe brain
18 chr7:79086600-79100600 Weak transcription Brain Anterior Caudate brain
19 chr7:79086600-79101000 Weak transcription Brain Angular Gyrus brain
20 chr7:79086600-79101400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr7:79086600-79104200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr7:79087600-79099800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr7:79087800-79093400 Weak transcription Brain Hippocampus Middle brain
24 chr7:79087800-79099800 Weak transcription Fetal Lung lung
25 chr7:79088000-79091800 Weak transcription Ovary ovary
26 chr7:79088000-79109600 Weak transcription Aorta Aorta
27 chr7:79088600-79092200 Enhancers HepG2 liver
28 chr7:79088800-79090800 Enhancers A549 lung
29 chr7:79088800-79093400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr7:79089000-79098800 Weak transcription Fetal Muscle Trunk muscle
31 chr7:79089000-79102800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr7:79089200-79098000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr7:79089200-79100200 Weak transcription Adipose Nuclei Adipose
34 chr7:79089200-79109600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr7:79089400-79093400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr7:79089400-79093800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr7:79089400-79101800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr7:79089600-79090600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr7:79089600-79090600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr7:79089600-79090600 Weak transcription NHLF lung
41 chr7:79089600-79095000 Weak transcription NH-A brain
42 chr7:79089800-79091800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr7:79089800-79092200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr7:79089800-79093600 Weak transcription Colon Smooth Muscle Colon
45 chr7:79089800-79099000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr7:79089800-79101800 Weak transcription Liver Liver
47 chr7:79090000-79101000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr7:79090200-79090600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr7:79090200-79091600 Enhancers Osteobl bone
50 chr7:79090200-79094200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015