Variant report

Variant rs2270488
Chromosome Location chr15:57817066-57817067
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57797000-57827200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr15:57801800-57819000 Weak transcription Esophagus oesophagus
3 chr15:57802000-57819600 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr15:57802600-57846600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr15:57802800-57822600 Weak transcription Brain Hippocampus Middle brain
6 chr15:57803000-57818800 Weak transcription Fetal Intestine Large intestine
7 chr15:57803200-57819400 Weak transcription Ovary ovary
8 chr15:57803200-57842800 Weak transcription Aorta Aorta
9 chr15:57807000-57818400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr15:57808400-57817200 Strong transcription H1 Cell Line embryonic stem cell
11 chr15:57808600-57817200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:57808600-57817800 Strong transcription iPS-18 Cell Line embryonic stem cell
13 chr15:57808800-57818000 Strong transcription HUES48 Cell Line embryonic stem cell
14 chr15:57808800-57818000 Strong transcription iPS-20b Cell Line embryonic stem cell
15 chr15:57808800-57818200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr15:57809000-57817200 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr15:57811000-57827800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr15:57811200-57819400 Weak transcription Fetal Intestine Small intestine
19 chr15:57811600-57817200 Weak transcription HUVEC blood vessel
20 chr15:57812400-57819400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr15:57813800-57817200 Strong transcription Fetal Stomach stomach
22 chr15:57814400-57817200 Strong transcription H9 Cell Line embryonic stem cell
23 chr15:57814600-57819400 Weak transcription Brain Cingulate Gyrus brain
24 chr15:57814600-57819400 Weak transcription Brain Substantia Nigra brain
25 chr15:57814600-57819600 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr15:57814600-57819600 Strong transcription Liver Liver
27 chr15:57814800-57819000 Weak transcription Left Ventricle heart
28 chr15:57814800-57819400 Weak transcription Brain Anterior Caudate brain
29 chr15:57814800-57819400 Weak transcription Fetal Lung lung
30 chr15:57814800-57819400 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr15:57814800-57819400 Weak transcription Right Atrium heart
32 chr15:57814800-57819600 Weak transcription Brain Angular Gyrus brain
33 chr15:57815200-57818400 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr15:57815200-57819600 Weak transcription Colon Smooth Muscle Colon
35 chr15:57815200-57819600 Weak transcription Rectal Smooth Muscle rectum
36 chr15:57815400-57819400 Weak transcription Fetal Kidney kidney
37 chr15:57816000-57819400 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr15:57816200-57819600 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr15:57816400-57817200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr15:57816400-57817200 Enhancers Placenta Placenta
41 chr15:57816400-57817200 Strong transcription Stomach Smooth Muscle stomach
42 chr15:57816800-57817200 Strong transcription Pancreas Pancrea
43 chr15:57816800-57817400 Strong transcription Fetal Heart heart
44 chr15:57816800-57819400 Weak transcription Stomach Mucosa stomach
45 chr15:57816800-57819600 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr15:57816800-57820800 Weak transcription Gastric stomach
47 chr15:57817000-57820800 Weak transcription HepG2 liver
48 chr15:57817000-57826600 Weak transcription Lung lung

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