Variant report

Variant rs2270826
Chromosome Location chr5:1799737-1799738
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:1791000-1800200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:1798400-1802400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr5:1798800-1800600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
4 chr5:1798800-1800600 Active TSS Primary T helper cells PMA-I stimulated --
5 chr5:1798800-1802200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr5:1798800-1802400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr5:1798800-1802800 Active TSS HUES48 Cell Line embryonic stem cell
8 chr5:1799000-1799800 Flanking Active TSS Primary B cells from cord blood blood
9 chr5:1799000-1800200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
10 chr5:1799000-1800400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
11 chr5:1799000-1802200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
12 chr5:1799000-1802200 Active TSS Left Ventricle heart
13 chr5:1799000-1802400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr5:1799000-1802400 Active TSS H9 Cell Line embryonic stem cell
15 chr5:1799000-1802400 Active TSS Psoas Muscle Psoas
16 chr5:1799000-1802600 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr5:1799000-1802600 Active TSS iPS-20b Cell Line embryonic stem cell
18 chr5:1799000-1802600 Active TSS Fetal Intestine Small intestine
19 chr5:1799000-1802600 Active TSS A549 lung
20 chr5:1799200-1799800 Active TSS HepG2 liver
21 chr5:1799200-1800200 Active TSS Breast Myoepithelial Primary Cells Breast
22 chr5:1799200-1800200 Active TSS Fetal Lung lung
23 chr5:1799200-1800200 Active TSS HMEC breast
24 chr5:1799200-1800200 Active TSS NHEK skin
25 chr5:1799200-1800600 Active TSS Primary T helper naive cells from peripheral blood blood
26 chr5:1799200-1800600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:1799200-1800600 Active TSS Fetal Intestine Large intestine
28 chr5:1799200-1800600 Active TSS HSMM muscle
29 chr5:1799200-1800800 Active TSS K562 blood
30 chr5:1799200-1801400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr5:1799200-1802200 Active TSS iPS-15b Cell Line embryonic stem cell
32 chr5:1799200-1802200 Active TSS iPS-18 Cell Line embryonic stem cell
33 chr5:1799200-1802200 Active TSS Aorta Aorta
34 chr5:1799200-1802200 Active TSS Fetal Kidney kidney
35 chr5:1799200-1802200 Active TSS Sigmoid Colon Sigmoid Colon
36 chr5:1799200-1802200 Active TSS Small Intestine intestine
37 chr5:1799200-1802200 Active TSS NHDF-Ad bronchial
38 chr5:1799200-1802400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
39 chr5:1799200-1802600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:1799200-1802600 Active TSS Pancreatic Islets Pancreatic Islet
41 chr5:1799200-1802800 Active TSS GM12878-XiMat blood
42 chr5:1799400-1799800 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr5:1799400-1799800 Active TSS Right Atrium heart
44 chr5:1799400-1800000 Weak transcription Fetal Heart heart
45 chr5:1799400-1800200 Active TSS Primary T cells from cord blood blood
46 chr5:1799400-1800200 Active TSS Primary hematopoietic stem cells short term culture blood
47 chr5:1799400-1800200 Active TSS Primary T regulatory cells fromperipheralblood blood
48 chr5:1799400-1800200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr5:1799400-1800200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr5:1799400-1800200 Active TSS Muscle Satellite Cultured Cells --

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