Variant report

Variant rs2272000
Chromosome Location chr8:19171376-19171377
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:19169800-19172000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
2 chr8:19170200-19172400 Active TSS Rectal Smooth Muscle rectum
3 chr8:19170400-19171400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr8:19170400-19172200 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr8:19170400-19172400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
6 chr8:19170400-19172400 Enhancers Fetal Brain Male brain
7 chr8:19170600-19171400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
8 chr8:19170600-19171400 Active TSS Duodenum Smooth Muscle Duodenum
9 chr8:19170600-19171400 Bivalent/Poised TSS Psoas Muscle Psoas
10 chr8:19170600-19172200 Active TSS Pancreas Pancrea
11 chr8:19170600-19172400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr8:19170600-19172400 Active TSS Brain Hippocampus Middle brain
13 chr8:19170600-19172400 Active TSS Pancreatic Islets Pancreatic Islet
14 chr8:19170600-19172400 Active TSS Right Atrium heart
15 chr8:19170600-19172400 Active TSS Right Ventricle heart
16 chr8:19170600-19172600 Active TSS A549 lung
17 chr8:19170800-19171400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr8:19170800-19171400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr8:19170800-19171400 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
20 chr8:19170800-19171400 Active TSS Aorta Aorta
21 chr8:19170800-19171400 Bivalent/Poised TSS Brain Germinal Matrix brain
22 chr8:19170800-19171400 Flanking Active TSS Colonic Mucosa Colon
23 chr8:19170800-19171400 Flanking Active TSS HMEC breast
24 chr8:19170800-19171600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr8:19170800-19172000 Active TSS Primary T cells from cord blood blood
26 chr8:19170800-19172000 Active TSS Brain Cingulate Gyrus brain
27 chr8:19170800-19172000 Weak transcription Fetal Heart heart
28 chr8:19170800-19172000 Active TSS Left Ventricle heart
29 chr8:19170800-19172200 Active TSS H9 Cell Line embryonic stem cell
30 chr8:19170800-19172200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
31 chr8:19170800-19172200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
32 chr8:19170800-19172200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr8:19170800-19172200 Active TSS Brain Anterior Caudate brain
34 chr8:19170800-19172200 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
35 chr8:19170800-19172200 Active TSS Brain Substantia Nigra brain
36 chr8:19170800-19172200 Active TSS Colon Smooth Muscle Colon
37 chr8:19170800-19172200 Active TSS Fetal Kidney kidney
38 chr8:19170800-19172200 Active TSS Gastric stomach
39 chr8:19170800-19172400 Active TSS ES-WA7 Cell Line embryonic stem cell
40 chr8:19170800-19172400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
41 chr8:19170800-19172400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
42 chr8:19170800-19172400 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr8:19170800-19172400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr8:19171000-19171400 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr8:19171000-19171400 Flanking Bivalent TSS/Enh Primary neutrophils fromperipheralblood blood
46 chr8:19171000-19171600 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
47 chr8:19171000-19171600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
48 chr8:19171000-19171800 Bivalent/Poised TSS Primary mononuclear cells fromperipheralblood Blood
49 chr8:19171000-19171800 Active TSS Adipose Nuclei Adipose
50 chr8:19171000-19171800 Bivalent/Poised TSS Thymus Thymus

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