Variant report

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs17086194	1.00[CEU][hapmap];0.90[CHB][hapmap];0.84[JPT][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17086263	0.87[TSI][hapmap]
rs3905326	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58765817	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61385702	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046491	chr9:85861492-86063992	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85937400-85998000	Weak transcription	Aorta	Aorta
2	chr9:85942600-85970200	Weak transcription	Psoas Muscle	Psoas
3	chr9:85950200-85976000	Weak transcription	HepG2	liver
4	chr9:85956200-85986600	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr9:85958200-85980600	Weak transcription	Left Ventricle	heart
6	chr9:85958200-86007600	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr9:85963600-85965000	Enhancers	Fetal Brain Male	brain
8	chr9:85963800-85964800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr9:85963800-85965000	Enhancers	Fetal Heart	heart
10	chr9:85964000-85964600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr9:85964000-85964600	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr9:85964000-85964600	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr9:85964000-85964800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr9:85964000-85964800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr9:85964000-85964800	Enhancers	Fetal Muscle Trunk	muscle
16	chr9:85964000-85965000	Enhancers	Ovary	ovary
17	chr9:85964200-85964800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr9:85964400-85964800	Weak transcription	Fetal Brain Female	brain
19	chr9:85964400-85965000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr9:85964400-85965000	Enhancers	Fetal Muscle Leg	muscle
21	chr9:85964400-85965200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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