Variant report

Variant rs2282885
Chromosome Location chr7:17345614-17345615
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:17337000-17346800 Active TSS Right Atrium heart
2 chr7:17338000-17346200 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr7:17339800-17346600 Weak transcription Pancreas Pancrea
4 chr7:17339800-17351400 Weak transcription Lung lung
5 chr7:17340400-17350600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr7:17340800-17347800 Enhancers HUES48 Cell Line embryonic stem cell
7 chr7:17341200-17346000 Weak transcription Right Ventricle heart
8 chr7:17341200-17349600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr7:17341200-17369600 Weak transcription Ovary ovary
10 chr7:17341600-17358200 Weak transcription Fetal Intestine Small intestine
11 chr7:17341600-17379600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr7:17341800-17347000 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr7:17342600-17347200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr7:17342800-17345800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
15 chr7:17342800-17347400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr7:17343000-17347600 Enhancers NHEK skin
17 chr7:17343000-17351000 Weak transcription Fetal Intestine Large intestine
18 chr7:17343200-17346800 Weak transcription Fetal Kidney kidney
19 chr7:17343200-17348800 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr7:17343200-17348800 Enhancers HepG2 liver
21 chr7:17343200-17351000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr7:17343400-17370600 Weak transcription Primary B cells from cord blood blood
23 chr7:17343800-17346800 Enhancers Primary hematopoietic stem cells blood
24 chr7:17343800-17347000 Enhancers Primary monocytes fromperipheralblood blood
25 chr7:17343800-17347600 Enhancers Brain Angular Gyrus brain
26 chr7:17343800-17348000 Enhancers Colon Smooth Muscle Colon
27 chr7:17344000-17345800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr7:17344000-17346600 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr7:17344000-17346800 Flanking Active TSS Liver Liver
30 chr7:17344000-17347000 Enhancers Brain Anterior Caudate brain
31 chr7:17344000-17347200 Enhancers Primary T cells from cord blood blood
32 chr7:17344000-17347400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr7:17344200-17347400 Enhancers Brain Substantia Nigra brain
34 chr7:17344200-17351600 Weak transcription Esophagus oesophagus
35 chr7:17344400-17346400 Enhancers NHLF lung
36 chr7:17344400-17347400 Enhancers Hela-S3 cervix
37 chr7:17344400-17348600 Enhancers Stomach Mucosa stomach
38 chr7:17344600-17346200 Enhancers Duodenum Smooth Muscle Duodenum
39 chr7:17344600-17348000 Active TSS Rectal Mucosa Donor 29 rectum
40 chr7:17344800-17346200 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr7:17344800-17346400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr7:17344800-17347000 Enhancers Monocytes-CD14+_RO01746 blood
43 chr7:17344800-17347200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr7:17344800-17347600 Enhancers HMEC breast
45 chr7:17345000-17346400 Weak transcription Fetal Heart heart
46 chr7:17345000-17346600 Weak transcription Brain Cingulate Gyrus brain
47 chr7:17345000-17346800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
48 chr7:17345000-17347800 Enhancers Left Ventricle heart
49 chr7:17345000-17351400 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr7:17345200-17346000 Weak transcription Pancreatic Islets Pancreatic Islet

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