Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:57369433..57371881-chr1:57374714..57376933,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1360151	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1411012	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1418471	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2076776	0.87[ASN][1000 genomes]
rs3738563	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs601662	0.87[ASN][1000 genomes]
rs603154	0.87[ASN][1000 genomes]
rs61766985	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs622299	0.87[ASN][1000 genomes]
rs629799	0.94[ASN][1000 genomes]
rs634144	0.87[ASN][1000 genomes]
rs635922	0.87[ASN][1000 genomes]
rs636879	0.87[ASN][1000 genomes]
rs647513	0.87[ASN][1000 genomes]
rs647962	0.87[ASN][1000 genomes]
rs648939	0.87[ASN][1000 genomes]
rs649798	0.87[ASN][1000 genomes]
rs658444	0.87[ASN][1000 genomes]
rs6588656	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6588657	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs659330	0.87[ASN][1000 genomes]
rs662377	0.87[ASN][1000 genomes]
rs664142	0.87[ASN][1000 genomes]
rs6669054	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs668551	0.87[ASN][1000 genomes]
rs6696110	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs706476	0.94[ASN][1000 genomes]
rs7520004	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7520006	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869295	chr1:56894955-57656562	Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:57364200-57375600	Weak transcription	Pancreas	Pancrea
2	chr1:57364600-57370400	Weak transcription	Gastric	stomach
3	chr1:57364600-57376200	Weak transcription	Stomach Mucosa	stomach
4	chr1:57367200-57378400	Enhancers	Liver	Liver
5	chr1:57368000-57370400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr1:57368000-57373800	Weak transcription	NHDF-Ad	bronchial
7	chr1:57368600-57370400	Weak transcription	Fetal Intestine Large	intestine
8	chr1:57369000-57370400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr1:57369800-57371200	Weak transcription	HepG2	liver
10	chr1:57370200-57370800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr1:57370200-57372800	Enhancers	Fetal Intestine Small	intestine

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