Variant report

Variant rs2292923
Chromosome Location chr9:139890130-139890131
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139887200-139891000 Enhancers Fetal Heart heart
2 chr9:139887600-139891200 Weak transcription H9 Cell Line embryonic stem cell
3 chr9:139887600-139891600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr9:139887600-139892200 Enhancers Fetal Lung lung
5 chr9:139887800-139890200 Transcr. at gene 5' and 3' Thymus Thymus
6 chr9:139887800-139890800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr9:139887800-139890800 Bivalent Enhancer Fetal Stomach stomach
8 chr9:139887800-139891000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:139887800-139891000 Bivalent Enhancer Fetal Intestine Large intestine
10 chr9:139887800-139891200 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr9:139887800-139891400 Weak transcription Brain Substantia Nigra brain
12 chr9:139887800-139892800 Bivalent Enhancer Fetal Muscle Trunk muscle
13 chr9:139888000-139890200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr9:139888000-139890200 Transcr. at gene 5' and 3' Esophagus oesophagus
15 chr9:139888000-139890200 Weak transcription K562 blood
16 chr9:139888000-139890400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr9:139888000-139890400 Weak transcription HSMMtube muscle
18 chr9:139888000-139891000 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr9:139888000-139892800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
20 chr9:139888200-139890400 Weak transcription Brain Angular Gyrus brain
21 chr9:139888200-139890400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:139888200-139890600 Weak transcription Liver Liver
23 chr9:139888200-139890600 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr9:139888200-139890800 Bivalent Enhancer Fetal Intestine Small intestine
25 chr9:139888400-139890200 Weak transcription GM12878-XiMat blood
26 chr9:139888400-139891000 Bivalent Enhancer Primary monocytes fromperipheralblood blood
27 chr9:139888600-139890200 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr9:139888600-139890400 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr9:139888600-139890400 Weak transcription HepG2 liver
30 chr9:139888600-139890600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr9:139888600-139890800 Enhancers Primary B cells from peripheral blood blood
32 chr9:139888600-139890800 Bivalent Enhancer Stomach Smooth Muscle stomach
33 chr9:139888800-139890200 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr9:139888800-139890200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr9:139888800-139890400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr9:139888800-139890400 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr9:139888800-139894600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:139889000-139890200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr9:139889000-139890400 Enhancers HMEC breast
40 chr9:139889000-139890600 Weak transcription H1 Cell Line embryonic stem cell
41 chr9:139889000-139890800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr9:139889000-139890800 Enhancers Primary hematopoietic stem cells blood
43 chr9:139889000-139892000 Enhancers Sigmoid Colon Sigmoid Colon
44 chr9:139889200-139890400 Enhancers Primary T cells from cord blood blood
45 chr9:139889200-139891600 Bivalent Enhancer Brain Germinal Matrix brain
46 chr9:139889200-139892000 Enhancers NHEK skin
47 chr9:139889400-139891000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr9:139889400-139891800 Enhancers Small Intestine intestine
49 chr9:139889400-139892200 Enhancers Pancreas Pancrea
50 chr9:139889600-139890200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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