Variant report

Variant rs2293660
Chromosome Location chr12:59272373-59272374
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:59260600-59284200 Strong transcription HUVEC blood vessel
2 chr12:59261400-59284200 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr12:59261600-59284200 Strong transcription Rectal Mucosa Donor 31 rectum
4 chr12:59261800-59275000 Strong transcription Fetal Lung lung
5 chr12:59261800-59280800 Strong transcription Fetal Intestine Large intestine
6 chr12:59262600-59272400 Weak transcription Fetal Heart heart
7 chr12:59262600-59295000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr12:59263000-59276400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr12:59263200-59277000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr12:59263400-59281400 Strong transcription NHEK skin
11 chr12:59263600-59278800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr12:59264200-59274800 Strong transcription HUES6 Cell Line embryonic stem cell
13 chr12:59264400-59274600 Strong transcription HUES64 Cell Line embryonic stem cell
14 chr12:59264800-59284200 Strong transcription Duodenum Mucosa Duodenum
15 chr12:59265000-59277200 Weak transcription GM12878-XiMat blood
16 chr12:59265400-59275400 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr12:59265400-59284200 Strong transcription Skeletal Muscle Female skeletal muscle
18 chr12:59265600-59276200 Strong transcription iPS-20b Cell Line embryonic stem cell
19 chr12:59265800-59275800 Strong transcription Fetal Kidney kidney
20 chr12:59266000-59282000 Strong transcription Adipose Nuclei Adipose
21 chr12:59266000-59311000 Weak transcription Fetal Thymus thymus
22 chr12:59266200-59274800 Strong transcription Colon Smooth Muscle Colon
23 chr12:59266200-59278600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr12:59266200-59284000 Strong transcription Fetal Muscle Trunk muscle
25 chr12:59266400-59274800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr12:59266400-59274800 Strong transcription Right Ventricle heart
27 chr12:59266400-59274800 Strong transcription Sigmoid Colon Sigmoid Colon
28 chr12:59266400-59274800 Strong transcription Skeletal Muscle Male skeletal muscle
29 chr12:59266400-59275000 Strong transcription Stomach Smooth Muscle stomach
30 chr12:59266400-59275400 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr12:59266400-59275400 Strong transcription Ovary ovary
32 chr12:59266400-59275800 Strong transcription Placenta Placenta
33 chr12:59266400-59275800 Strong transcription Left Ventricle heart
34 chr12:59266400-59277600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr12:59266400-59277600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr12:59266400-59284000 Strong transcription Fetal Muscle Leg muscle
37 chr12:59266600-59274600 Weak transcription Brain Germinal Matrix brain
38 chr12:59266600-59275000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr12:59266600-59275400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr12:59266800-59273400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr12:59266800-59273400 Strong transcription Brain Hippocampus Middle brain
42 chr12:59267000-59273800 Strong transcription Lung lung
43 chr12:59267000-59275400 Strong transcription Fetal Stomach stomach
44 chr12:59267200-59274600 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr12:59267200-59274600 Strong transcription Rectal Smooth Muscle rectum
46 chr12:59267200-59274800 Strong transcription Fetal Intestine Small intestine
47 chr12:59267400-59274600 Strong transcription Brain Inferior Temporal Lobe brain
48 chr12:59267400-59274600 Strong transcription Brain Substantia Nigra brain
49 chr12:59267400-59274800 Strong transcription Duodenum Smooth Muscle Duodenum
50 chr12:59267400-59275400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell

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