Variant report

Variant rs2294791
Chromosome Location chr6:53787267-53787268
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53759200-53787600 Weak transcription Spleen Spleen
2 chr6:53759200-53794400 Weak transcription Right Ventricle heart
3 chr6:53759600-53789800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr6:53760400-53789400 Weak transcription Stomach Mucosa stomach
5 chr6:53760400-53791200 Weak transcription Hela-S3 cervix
6 chr6:53760600-53793600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr6:53761400-53787400 Weak transcription HMEC breast
8 chr6:53761400-53791200 Weak transcription Colon Smooth Muscle Colon
9 chr6:53761600-53790800 Weak transcription Fetal Heart heart
10 chr6:53762000-53791200 Weak transcription Muscle Satellite Cultured Cells --
11 chr6:53762000-53791600 Weak transcription Fetal Lung lung
12 chr6:53768800-53796000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr6:53769200-53790400 Weak transcription Placenta Amnion Placenta Amnion
14 chr6:53770000-53795800 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr6:53770600-53787400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr6:53772000-53787600 Weak transcription Pancreas Pancrea
17 chr6:53772000-53803000 Weak transcription Lung lung
18 chr6:53776000-53790600 Weak transcription Brain Germinal Matrix brain
19 chr6:53776600-53789200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr6:53776800-53791000 Weak transcription HUVEC blood vessel
21 chr6:53777600-53790600 Strong transcription Fetal Thymus thymus
22 chr6:53778000-53787800 Strong transcription Dnd41 blood
23 chr6:53778000-53791800 Weak transcription Small Intestine intestine
24 chr6:53779200-53787600 Weak transcription Aorta Aorta
25 chr6:53779400-53787600 Weak transcription H9 Cell Line embryonic stem cell
26 chr6:53779600-53787400 Weak transcription Esophagus oesophagus
27 chr6:53779600-53791400 Weak transcription Placenta Placenta
28 chr6:53780200-53790400 Weak transcription Gastric stomach
29 chr6:53781000-53789200 Weak transcription Primary B cells from peripheral blood blood
30 chr6:53781000-53791200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr6:53782200-53787800 Weak transcription Brain Angular Gyrus brain
32 chr6:53782400-53789400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr6:53782400-53790400 Weak transcription Brain Cingulate Gyrus brain
34 chr6:53783000-53791400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr6:53783200-53789400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:53783400-53787600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr6:53783400-53789800 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr6:53783600-53790800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr6:53783800-53787800 Strong transcription HepG2 liver
40 chr6:53784000-53787400 Weak transcription NH-A brain
41 chr6:53784000-53790200 Weak transcription Brain Substantia Nigra brain
42 chr6:53784200-53787400 Strong transcription Brain Anterior Caudate brain
43 chr6:53784200-53788000 Strong transcription HSMMtube muscle
44 chr6:53784400-53787600 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr6:53784400-53787800 Strong transcription Primary T cells from cord blood blood
46 chr6:53784400-53787800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:53784400-53787800 Strong transcription Fetal Intestine Large intestine
48 chr6:53784400-53788000 Strong transcription Duodenum Mucosa Duodenum
49 chr6:53784400-53790400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr6:53784600-53789000 Weak transcription Monocytes-CD14+_RO01746 blood

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