Variant report

Variant rs2297226
Chromosome Location chr1:186343759-186343760
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186335200-186343800 Weak transcription Spleen Spleen
2 chr1:186342200-186346600 Active TSS NHLF lung
3 chr1:186342400-186343800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr1:186342400-186343800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:186342400-186344000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:186342400-186345800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:186342400-186346000 Active TSS Fetal Kidney kidney
8 chr1:186342400-186346400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:186342600-186343800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:186342600-186344200 Flanking Active TSS Primary B cells from cord blood blood
11 chr1:186342600-186344200 Active TSS Brain Germinal Matrix brain
12 chr1:186342600-186345800 Active TSS Breast Myoepithelial Primary Cells Breast
13 chr1:186342600-186345800 Active TSS NH-A brain
14 chr1:186342600-186346000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:186342600-186346000 Active TSS K562 blood
16 chr1:186342600-186346400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:186342600-186346400 Active TSS HUES6 Cell Line embryonic stem cell
18 chr1:186342800-186343800 Flanking Active TSS Stomach Smooth Muscle stomach
19 chr1:186342800-186345800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:186342800-186346000 Active TSS Fetal Brain Female brain
21 chr1:186342800-186346000 Active TSS Fetal Stomach stomach
22 chr1:186342800-186346000 Active TSS HMEC breast
23 chr1:186342800-186346000 Active TSS NHDF-Ad bronchial
24 chr1:186342800-186346200 Active TSS A549 lung
25 chr1:186342800-186346400 Active TSS HUES48 Cell Line embryonic stem cell
26 chr1:186342800-186349000 Active TSS GM12878-XiMat blood
27 chr1:186343000-186343800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
28 chr1:186343000-186343800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:186343000-186343800 Flanking Active TSS Liver Liver
30 chr1:186343000-186343800 Flanking Active TSS Brain Angular Gyrus brain
31 chr1:186343000-186343800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr1:186343000-186344000 Flanking Active TSS Primary T cells from cord blood blood
33 chr1:186343000-186344000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
34 chr1:186343000-186344200 Active TSS Right Atrium heart
35 chr1:186343000-186345400 ZNF genes & repeats Fetal Brain Male brain
36 chr1:186343000-186345800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:186343000-186345800 Active TSS Fetal Intestine Large intestine
38 chr1:186343000-186345800 Active TSS Fetal Thymus thymus
39 chr1:186343000-186345800 Active TSS Hela-S3 cervix
40 chr1:186343000-186346000 Active TSS H1 Cell Line embryonic stem cell
41 chr1:186343000-186346000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:186343000-186346000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
43 chr1:186343000-186346000 Active TSS Fetal Muscle Leg muscle
44 chr1:186343000-186346000 Active TSS Psoas Muscle Psoas
45 chr1:186343000-186346400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:186343200-186343800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
47 chr1:186343200-186343800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
48 chr1:186343200-186343800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:186343200-186343800 Flanking Active TSS Brain Inferior Temporal Lobe brain
50 chr1:186343200-186344000 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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