Variant report
Variant | rs2299841 |
---|---|
Chromosome Location | chr18:9828448-9828449 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr18:9807800-9832000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
2 | chr18:9812400-9834600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
3 | chr18:9812400-9834800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
4 | chr18:9823000-9830600 | Enhancers | Primary monocytes fromperipheralblood | blood |
5 | chr18:9823800-9829200 | Enhancers | Placenta | Placenta |
6 | chr18:9823800-9829400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
7 | chr18:9823800-9829600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
8 | chr18:9824400-9829000 | Enhancers | Fetal Intestine Small | intestine |
9 | chr18:9824400-9829200 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
10 | chr18:9824600-9829600 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
11 | chr18:9825200-9830400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
12 | chr18:9825400-9829800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
13 | chr18:9825400-9832200 | Weak transcription | Fetal Stomach | stomach |
14 | chr18:9825400-9849800 | Weak transcription | Gastric | stomach |
15 | chr18:9825800-9831000 | Weak transcription | Brain Hippocampus Middle | brain |
16 | chr18:9825800-9831200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
17 | chr18:9825800-9831200 | Weak transcription | Right Ventricle | heart |
18 | chr18:9825800-9831400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
19 | chr18:9825800-9835400 | Weak transcription | Brain Angular Gyrus | brain |
20 | chr18:9826000-9828600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
21 | chr18:9826000-9828800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
22 | chr18:9826000-9828800 | Enhancers | Stomach Smooth Muscle | stomach |
23 | chr18:9826000-9829200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
24 | chr18:9826000-9831000 | Weak transcription | Brain Cingulate Gyrus | brain |
25 | chr18:9826000-9835200 | Weak transcription | Brain Anterior Caudate | brain |
26 | chr18:9826200-9830800 | Weak transcription | Brain Substantia Nigra | brain |
27 | chr18:9826200-9831000 | Weak transcription | Aorta | Aorta |
28 | chr18:9826200-9831800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
29 | chr18:9826400-9830200 | Weak transcription | Fetal Intestine Large | intestine |
30 | chr18:9826600-9828600 | Genic enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
31 | chr18:9826600-9829400 | Enhancers | NHLF | lung |
32 | chr18:9826800-9828600 | Enhancers | Fetal Muscle Leg | muscle |
33 | chr18:9826800-9829400 | Enhancers | NH-A | brain |
34 | chr18:9826800-9829600 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
35 | chr18:9827000-9829000 | Enhancers | Duodenum Mucosa | Duodenum |
36 | chr18:9827200-9828600 | Enhancers | Primary B cells from cord blood | blood |
37 | chr18:9827200-9829600 | Enhancers | NHDF-Ad | bronchial |
38 | chr18:9827400-9829000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
39 | chr18:9827400-9829000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
40 | chr18:9827400-9829000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
41 | chr18:9827400-9829000 | Enhancers | Muscle Satellite Cultured Cells | -- |
42 | chr18:9827400-9829000 | Flanking Active TSS | A549 | lung |
43 | chr18:9827600-9828600 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
44 | chr18:9827600-9828600 | Enhancers | Fetal Lung | lung |
45 | chr18:9827600-9830800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
46 | chr18:9827800-9829000 | Enhancers | HSMM | muscle |
47 | chr18:9827800-9829400 | Flanking Active TSS | NHEK | skin |
48 | chr18:9827800-9837800 | Weak transcription | Primary B cells from peripheral blood | blood |
49 | chr18:9828000-9828600 | Enhancers | HSMMtube | muscle |
50 | chr18:9828000-9829000 | Enhancers | Esophagus | oesophagus |