The 2.0 version of rSNPBase

Variant report

Variant rs2305572
Chromosome Location chr2:33748716-33748717
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33710400-33775400 Weak transcription Pancreas Pancrea
2 chr2:33728800-33750800 Weak transcription Primary hematopoietic stem cells blood
3 chr2:33730000-33751600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:33735400-33761800 Weak transcription Spleen Spleen
5 chr2:33735800-33754800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:33737400-33749800 Strong transcription GM12878-XiMat blood
7 chr2:33737600-33760800 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:33738600-33782800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:33738800-33777200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:33739200-33761800 Weak transcription Fetal Muscle Trunk muscle
11 chr2:33740000-33752000 Weak transcription Lung lung
12 chr2:33740800-33751200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr2:33740800-33754600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr2:33740800-33790000 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr2:33744800-33758200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr2:33745400-33750800 Strong transcription Primary B cells from peripheral blood blood
17 chr2:33745400-33753400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr2:33746400-33749000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr2:33747200-33751200 Weak transcription Primary B cells from cord blood blood
20 chr2:33747200-33755000 Weak transcription Fetal Muscle Leg muscle
21 chr2:33747200-33757600 Weak transcription Psoas Muscle Psoas
22 chr2:33747400-33748800 Enhancers Fetal Brain Male brain
23 chr2:33747400-33752200 Weak transcription Adipose Nuclei Adipose
24 chr2:33747400-33761800 Weak transcription Aorta Aorta
25 chr2:33747800-33754600 Weak transcription Osteobl bone
26 chr2:33747800-33756600 Weak transcription Right Ventricle heart
27 chr2:33747800-33780200 Weak transcription Brain Anterior Caudate brain
28 chr2:33748000-33751200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:33748000-33751200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:33748000-33751200 Weak transcription Left Ventricle heart
31 chr2:33748000-33752000 Weak transcription Brain Hippocampus Middle brain
32 chr2:33748000-33752200 Weak transcription Brain Substantia Nigra brain
33 chr2:33748000-33752400 Weak transcription Brain Cingulate Gyrus brain
34 chr2:33748000-33754600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr2:33748000-33761800 Weak transcription Fetal Stomach stomach
36 chr2:33748000-33774400 Weak transcription Stomach Smooth Muscle stomach
37 chr2:33748000-33790400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr2:33748200-33750600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr2:33748200-33751000 Weak transcription NHDF-Ad bronchial
40 chr2:33748200-33780200 Weak transcription Brain Angular Gyrus brain
41 chr2:33748400-33754600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr2:33748400-33755000 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015