Variant report

Variant	rs2311741
Chromosome Location	chr10:45556925-45556926
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs58519470	0.97[ASN][1000 genomes]
rs7478211	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831848	chr10:45490176-45667670	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv971917	chr10:45547355-45595482	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2750897	chr10:45550145-45820136	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45552000-45559600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:45554400-45558800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:45554600-45557200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr10:45554600-45558800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:45554800-45557200	Weak transcription	HMEC	breast
6	chr10:45555000-45557200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr10:45555000-45557200	Weak transcription	NHEK	skin
8	chr10:45555000-45557600	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr10:45555200-45557200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr10:45555400-45558800	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr10:45555600-45558800	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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