The 2.0 version of rSNPBase

Variant report

Variant rs2313245
Chromosome Location chr1:227755767-227755768
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227751800-227756400 Weak transcription Spleen Spleen
2 chr1:227752000-227756200 Weak transcription Gastric stomach
3 chr1:227752000-227756400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:227752000-227756400 Weak transcription Lung lung
5 chr1:227752000-227757400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:227752000-227759800 Weak transcription Left Ventricle heart
7 chr1:227752000-227760000 Weak transcription Esophagus oesophagus
8 chr1:227752000-227766800 Weak transcription Ovary ovary
9 chr1:227752200-227756200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:227752200-227756400 Weak transcription Right Ventricle heart
11 chr1:227752200-227758200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr1:227752200-227758800 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:227752200-227760000 Weak transcription Fetal Intestine Large intestine
14 chr1:227752200-227763200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:227752200-227774400 Weak transcription Aorta Aorta
16 chr1:227752400-227755800 Weak transcription NHLF lung
17 chr1:227752400-227756000 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:227752400-227756200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:227752400-227756600 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:227752400-227756600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:227752400-227757000 Weak transcription NHDF-Ad bronchial
22 chr1:227752400-227757400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:227752400-227757600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:227752400-227757800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:227752400-227758000 Weak transcription Osteobl bone
26 chr1:227752400-227758200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:227752400-227759600 Weak transcription Primary T cells from cord blood blood
28 chr1:227752400-227759800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:227752400-227759800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:227752400-227759800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:227752400-227760000 Weak transcription Fetal Kidney kidney
32 chr1:227752400-227760000 Weak transcription Fetal Muscle Leg muscle
33 chr1:227752400-227760000 Weak transcription NHEK skin
34 chr1:227752400-227760200 Weak transcription Fetal Heart heart
35 chr1:227752400-227760200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:227752400-227763000 Weak transcription Stomach Mucosa stomach
37 chr1:227752400-227763800 Weak transcription HSMMtube muscle
38 chr1:227752400-227766800 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:227752400-227780600 Weak transcription Rectal Smooth Muscle rectum
40 chr1:227752600-227755800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:227752600-227756200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:227752600-227756200 Weak transcription Pancreas Pancrea
43 chr1:227752600-227756600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:227752600-227757800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr1:227752600-227757800 Weak transcription Fetal Muscle Trunk muscle
46 chr1:227752600-227757800 Weak transcription Right Atrium heart
47 chr1:227752600-227759800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:227752600-227760000 Weak transcription Primary B cells from peripheral blood blood
49 chr1:227752600-227760000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:227752600-227760000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015