The 2.0 version of rSNPBase

Variant report

Variant rs2328847
Chromosome Location chr6:24679928-24679929
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24668200-24699800 Weak transcription Brain Substantia Nigra brain
2 chr6:24668800-24691800 Weak transcription Psoas Muscle Psoas
3 chr6:24669000-24681800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr6:24669000-24686400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr6:24669000-24690400 Weak transcription Gastric stomach
6 chr6:24669000-24693000 Weak transcription Primary T cells from cord blood blood
7 chr6:24669000-24701200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr6:24669200-24686200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr6:24669200-24690800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr6:24669400-24687600 Weak transcription Left Ventricle heart
11 chr6:24669400-24701600 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr6:24671400-24687200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr6:24674200-24700000 Weak transcription Fetal Lung lung
14 chr6:24674600-24683600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr6:24674600-24703400 Weak transcription Aorta Aorta
16 chr6:24674800-24681800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr6:24674800-24681800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr6:24674800-24681800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:24674800-24698200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:24674800-24702200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:24674800-24702200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr6:24674800-24702600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:24675000-24683800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr6:24675400-24680800 Weak transcription H1 Cell Line embryonic stem cell
25 chr6:24675600-24683400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr6:24675800-24683600 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr6:24676000-24680600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:24676400-24680200 Weak transcription Primary B cells from peripheral blood blood
29 chr6:24676600-24681800 Weak transcription Thymus Thymus
30 chr6:24676600-24702600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr6:24677000-24681200 Enhancers Liver Liver
32 chr6:24678000-24682200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:24678200-24699600 Weak transcription Primary hematopoietic stem cells blood
34 chr6:24678200-24702600 Weak transcription HSMMtube muscle
35 chr6:24678800-24680000 Enhancers HepG2 liver
36 chr6:24678800-24687000 Weak transcription Placenta Placenta
37 chr6:24678800-24701200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr6:24678800-24701600 Weak transcription Stomach Smooth Muscle stomach
39 chr6:24679400-24700600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr6:24679600-24680200 Weak transcription Fetal Intestine Large intestine
41 chr6:24679600-24699800 Weak transcription Brain Cingulate Gyrus brain
42 chr6:24679800-24680400 Enhancers Fetal Intestine Small intestine
43 chr6:24679800-24691800 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015