Variant report

Variant rs2330597
Chromosome Location chr21:48042869-48042870
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48025800-48054800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr21:48037200-48046800 Enhancers Primary neutrophils fromperipheralblood blood
3 chr21:48038600-48043400 Enhancers Primary monocytes fromperipheralblood blood
4 chr21:48038800-48049000 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr21:48039200-48048400 Enhancers Primary T helper cells fromperipheralblood blood
6 chr21:48039800-48044400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr21:48040000-48043200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr21:48040000-48044200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr21:48040000-48044800 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr21:48040000-48044800 Enhancers Fetal Thymus thymus
11 chr21:48040000-48045000 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr21:48040000-48049200 Enhancers Primary T cells fromperipheralblood blood
13 chr21:48040200-48043200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr21:48040200-48043200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr21:48040200-48043400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr21:48040200-48044600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr21:48040400-48044200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr21:48040400-48044600 Enhancers Cortex derived primary cultured neurospheres brain
19 chr21:48040400-48044800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr21:48040400-48044800 Enhancers Brain Cingulate Gyrus brain
21 chr21:48040400-48044800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
22 chr21:48040800-48043200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr21:48040800-48043400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr21:48040800-48043600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr21:48040800-48044600 Enhancers Primary hematopoietic stem cells blood
26 chr21:48041000-48043200 Enhancers Thymus Thymus
27 chr21:48041200-48044200 Enhancers Brain Substantia Nigra brain
28 chr21:48041200-48044800 Enhancers Fetal Muscle Leg muscle
29 chr21:48041200-48045000 Enhancers Brain Angular Gyrus brain
30 chr21:48041400-48043200 Enhancers Primary T helper 17 cells PMA-I stimulated --
31 chr21:48041600-48043000 Enhancers GM12878-XiMat blood
32 chr21:48041600-48043200 Enhancers Primary B cells from cord blood blood
33 chr21:48041600-48043200 Enhancers Primary B cells from peripheral blood blood
34 chr21:48041800-48044400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr21:48041800-48044600 Enhancers Brain Anterior Caudate brain
36 chr21:48042000-48044000 Weak transcription Fetal Lung lung
37 chr21:48042000-48045200 Weak transcription Adipose Nuclei Adipose
38 chr21:48042200-48043200 Weak transcription Stomach Mucosa stomach
39 chr21:48042200-48043600 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr21:48042400-48043000 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr21:48042400-48044000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr21:48042400-48044000 Weak transcription Fetal Muscle Trunk muscle
43 chr21:48042600-48043200 Flanking Active TSS Brain Hippocampus Middle brain
44 chr21:48042600-48044800 Enhancers Brain Inferior Temporal Lobe brain
45 chr21:48042600-48045600 Enhancers Primary T cells from cord blood blood
46 chr21:48042600-48054800 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr21:48042800-48043200 Enhancers HepG2 liver
48 chr21:48042800-48043400 Enhancers Dnd41 blood
49 chr21:48042800-48043400 Enhancers Monocytes-CD14+_RO01746 blood
50 chr21:48042800-48043600 Enhancers Primary hematopoietic stem cells short term culture blood

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