The 2.0 version of rSNPBase

Variant report

Variant rs2340722
Chromosome Location chr1:161856424-161856425
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161795200-161860200 Weak transcription Lung lung
2 chr1:161795800-161859000 Weak transcription Pancreas Pancrea
3 chr1:161808400-161863200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:161808800-161858800 Weak transcription Spleen Spleen
5 chr1:161823600-161858800 Weak transcription Thymus Thymus
6 chr1:161823800-161857000 Weak transcription Ovary ovary
7 chr1:161824000-161859000 Weak transcription Brain Cingulate Gyrus brain
8 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:161824400-161882000 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:161824600-161858600 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:161825600-161863200 Weak transcription Fetal Heart heart
12 chr1:161825800-161859200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:161826200-161858600 Weak transcription Psoas Muscle Psoas
14 chr1:161826200-161860400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:161834200-161859000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:161834400-161863200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:161834600-161857400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:161834600-161858800 Weak transcription GM12878-XiMat blood
19 chr1:161834600-161859000 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:161834600-161859000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:161835000-161856800 Weak transcription Placenta Placenta
22 chr1:161835400-161857200 Weak transcription Dnd41 blood
23 chr1:161835800-161858800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:161836400-161857200 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:161836600-161868000 Weak transcription Fetal Kidney kidney
26 chr1:161836600-161888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:161836800-161861000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:161837200-161858600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr1:161838400-161856600 Weak transcription Duodenum Mucosa Duodenum
30 chr1:161838400-161856800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:161838400-161857200 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr1:161838400-161858200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr1:161838600-161857400 Weak transcription Primary B cells from peripheral blood blood
34 chr1:161838800-161857600 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:161839000-161858200 Weak transcription Primary T cells fromperipheralblood blood
36 chr1:161841000-161863000 Weak transcription HepG2 liver
37 chr1:161841200-161858400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:161842400-161856600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:161842400-161863600 Weak transcription Brain Angular Gyrus brain
40 chr1:161843200-161864800 Weak transcription Brain Substantia Nigra brain
41 chr1:161843600-161859000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:161846400-161856600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:161848600-161858600 Weak transcription Aorta Aorta
44 chr1:161848600-161860200 Weak transcription Esophagus oesophagus
45 chr1:161849400-161856600 Weak transcription Primary B cells from cord blood blood
46 chr1:161849800-161860200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:161850600-161858600 Weak transcription Fetal Thymus thymus
48 chr1:161853400-161858800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:161853600-161859200 Weak transcription Brain Anterior Caudate brain
50 chr1:161854600-161871400 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015