The 2.0 version of rSNPBase

Variant report

Variant rs2353049
Chromosome Location chr6:106981253-106981254
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106961000-107001400 Weak transcription Gastric stomach
2 chr6:106964800-106991000 Weak transcription Spleen Spleen
3 chr6:106964800-107029800 Weak transcription Small Intestine intestine
4 chr6:106970600-107022400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:106973400-106985600 Weak transcription Stomach Mucosa stomach
6 chr6:106973600-106985800 Weak transcription Thymus Thymus
7 chr6:106973600-106986000 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr6:106973600-106992800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr6:106974600-106982400 Strong transcription Primary hematopoietic stem cells blood
10 chr6:106974800-106982600 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr6:106975000-106981600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:106975000-106983400 Strong transcription Rectal Mucosa Donor 31 rectum
13 chr6:106975200-106983000 Strong transcription Adipose Nuclei Adipose
14 chr6:106976000-106983200 Strong transcription Duodenum Mucosa Duodenum
15 chr6:106976200-106982800 Strong transcription Sigmoid Colon Sigmoid Colon
16 chr6:106976400-106981600 Strong transcription Primary B cells from cord blood blood
17 chr6:106976400-106986200 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr6:106976600-106982000 Genic enhancers Primary T helper cells PMA-I stimulated --
19 chr6:106976600-106991400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:106977000-106986400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:106977600-106981600 Genic enhancers NHEK skin
22 chr6:106978000-106982400 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr6:106978600-106983400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr6:106978800-106981800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr6:106978800-106984200 Weak transcription NH-A brain
26 chr6:106978800-106985600 Weak transcription Fetal Thymus thymus
27 chr6:106978800-106993800 Weak transcription NHLF lung
28 chr6:106979000-106982200 Weak transcription Muscle Satellite Cultured Cells --
29 chr6:106979000-107001400 Weak transcription Pancreas Pancrea
30 chr6:106979200-106981400 Weak transcription Osteobl bone
31 chr6:106979200-106982000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:106979400-106982200 Weak transcription HUVEC blood vessel
33 chr6:106979600-106984200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr6:106979600-106987200 Weak transcription HepG2 liver
35 chr6:106979800-106981400 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr6:106980000-106982400 Strong transcription Rectal Smooth Muscle rectum
37 chr6:106980200-106983000 Genic enhancers Primary B cells from peripheral blood blood
38 chr6:106980200-106984400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr6:106980400-106982800 Enhancers Primary neutrophils fromperipheralblood blood
40 chr6:106980800-106981400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr6:106980800-106981400 Enhancers HUES6 Cell Line embryonic stem cell
42 chr6:106980800-106981400 Strong transcription Primary T cells from cord blood blood
43 chr6:106980800-106981600 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr6:106980800-106981800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr6:106980800-106981800 Genic enhancers NHDF-Ad bronchial
46 chr6:106980800-106982000 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr6:106980800-106982200 Genic enhancers Primary hematopoietic stem cells short term culture blood
48 chr6:106980800-106982200 Strong transcription Dnd41 blood
49 chr6:106980800-106982400 Enhancers Placenta Placenta
50 chr6:106980800-106982800 Genic enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015