Variant report

Variant rs2354937
Chromosome Location chr4:48794403-48794404
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48789600-48801000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr4:48791200-48798400 Weak transcription Brain Hippocampus Middle brain
3 chr4:48791600-48794600 Weak transcription Brain Angular Gyrus brain
4 chr4:48792600-48794600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr4:48794000-48794600 Enhancers Primary B cells from cord blood blood
6 chr4:48794000-48794600 Enhancers Rectal Smooth Muscle rectum
7 chr4:48794000-48794800 Enhancers Colon Smooth Muscle Colon
8 chr4:48794200-48794600 Enhancers Brain Anterior Caudate brain
9 chr4:48794200-48794800 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr4:48794200-48794800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr4:48794200-48795000 Enhancers Fetal Heart heart
12 chr4:48794200-48795400 Enhancers Primary monocytes fromperipheralblood blood
13 chr4:48794400-48794600 Flanking Active TSS Stomach Smooth Muscle stomach
14 chr4:48794400-48794800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr4:48794400-48794800 Enhancers Brain Cingulate Gyrus brain
16 chr4:48794400-48794800 Enhancers Brain Inferior Temporal Lobe brain
17 chr4:48794400-48794800 Flanking Active TSS GM12878-XiMat blood
18 chr4:48794400-48795000 Enhancers Primary B cells from peripheral blood blood
19 chr4:48794400-48795200 Enhancers Monocytes-CD14+_RO01746 blood

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