Variant report

Variant	rs2357608
Chromosome Location	chr4:148087042-148087043
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10027201	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10519877	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1354883	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1395816	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1395819	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1466985	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1507484	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1507488	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1507489	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1507490	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1507491	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1911587	0.82[AFR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2357598	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2357606	0.95[AFR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2357609	0.95[AFR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4835073	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4835380	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4835381	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59870625	0.95[AFR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024629	chr4:147987351-148277008	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148080200-148088800	Weak transcription	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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